Lates calcarifer (barramundi perch): 108873981
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Entry
108873981 CDS
T04895
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04510
Focal adhesion
lcf04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108873981 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108873981 (rapgef1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
108873981
NCBI-ProteinID:
XP_050928901
UniProt:
A0AAJ8DRL1
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Position
LG9:complement(15304787..15346718)
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AA seq
1203 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSTEKPANKKV
SRLEEHEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNKPAPPATTAESSVSSEMPLIDREQEVSSKTAPAAAPAEAASDIPDEDVAPP
KPPLPEAKMAELRAQLSADAGQRRPSQKENPPPALPPKKRQSAPSPTRVAVVAPMSRGSS
LPSSVHRQQQDYEQEFLQRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQ
CSRNTSCETLDNTENYDPDYDFLHQDLSAGENLPPIPVGGCLSPLPESHSESSSPVPGQH
PSHPRFSAPPPQQPPEYWTPQPNQTNPLQSSRISAPPALPQKKRRSTQTSPFPDTGSRVL
YERYPSQYDNLSEEELHPTPPFPLFTPISPMPQTNGGVFVSQYIASENADVPASPPPLPE
KKSRHILQYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEP
MQPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEAGSGLGLSMSVSNSYLIGQ
ASLTTPTSLDHVALTNATILDGSGGGPNGSLAGSMGSVAVCLPSESSLTDSLHTSASESA
NDEGGEGEYVNLYSSSQANGELPLSLRETIAADDVLQDPTPQMPSTNSKEAVDKERRQKS
TESAGSDEEDVDELSLIDHKEIMNRITLKQENDDGPDVRAGSGDILLVHATETDRKDLVL
YCEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVEL
TEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQKKLLRYTNSLKPLAARGVSARPG
TLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVR
SLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGL
EEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQ
QFNILDSMRRFQQVHYELKRNEDIVSFFNDFSDHLAEEALWELSLKIKPRNIARRKTDRE
EKT
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaaaatagagagcaagcaagactcacaacggtcccatctgtcctctttcacc
atgaaactgatggacaagttccactctcccaagatcaagaggactccatccaagaagggc
aagcaactgcagcccgagccagcagccaagagcactgagaaacctgctaacaagaaggtc
agtcggctggaggaacacgagaaggaggtggtcagtgccctgcgctacttcaagacaatc
gtggacaaaatggtcgtggagaagaaggtgctggagatgctgccaggctcagccagcaag
gtgctcgaagccatcctgcctctggtgcaggtggaggctcggatacaacacagttcggcg
ctgtcttcctgccataaccgtgtgtaccaaagtctggccaacctcatccgctgggcagac
caggtgatgctggacggcatcgacttggaggacaaggaaaatgtggcatctgtcacaagt
gtcatcaaagcagtgctggatggagtcaaggagctggtgaagctgaccatagagaaacag
gagcagccgtcacccactacccctaacaaaccagcaccacctgctaccacagcagagagc
agcgtgtcatcagagatgcccttgatagatcgggagcaggaggtctcgagtaagactgct
ccagcagctgctcctgcagaggctgcctctgacataccagatgaggacgtagcccctccc
aaacccccgcttcctgaggcgaagatggcagagctcagagcacagttgagtgctgacgct
ggccaaaggagaccctctcagaaggagaatcctccaccagctctcccccctaagaagcgc
cagtcagccccttcgcccacacgggtggcagtggttgcccctatgagccgtggctccagc
ctgcctagcagcgtgcatagacagcagcaggactatgagcaggagttccttcagaggcgt
ttctctggggggagccagtcatatgggggtgactccccacgtctgtctccctgcagcagc
atggggaaactcagcaagtctgacgaacaactctcttcgatggagcaggacagtggtcag
tgctctcgtaacaccagctgtgagacgcttgacaacacagagaattacgacccggattat
gatttccttcaccaggacttgtcggctggggaaaacctacccccaataccagtgggaggg
tgcctgagccccctgcctgagtctcacagcgagtcctcctccccagtccccggacagcat
ccctcgcacccccgctttagcgctcctccaccacagcagccaccagagtactggaccccg
cagcccaatcaaaccaatcccttacagtcctcccgcatcagcgcgccacccgcccttccc
cagaagaagcggcgcagcactcagacgtcgcccttccccgacacagggtcgagggttctg
tatgagcgctacccctcccagtacgacaacctgtcagaagaggagctccaccctacaccg
cctttcccccttttcacacccatctcacccatgccccagactaatgggggcgtgttcgtt
tcccagtacatcgccagcgagaatgcagatgtccccgccagcccaccaccactcccagaa
aagaaaagcagacacatcctccagtacatgcagtttgtggaagactactctgagccgcag
ccgtccgtgttctaccagatgccacagagtgagagcatctatgagcagcgcaacaagcgc
ttccaggaggtctacggcttcaacgactccttcagcagcaccgactcggtccatgagccg
atgcaacccccagcattgcccccgaaacaaaggcaactggcctcccactcttcctccccc
tcttcctcctcctcctcttctctctcctgccacctccagccgtctgtagcggccatggag
gaggcaggctctgggctgggcctcagcatgtccgtctctaactcctacctgattggccag
gcatccttgaccacacccacgagcttggaccatgttgccttgaccaatgccaccattctg
gatggcagcgggggcgggcccaacggttccctggctggctcaatgggctctgtggctgtc
tgtcttccttctgagtcttctctcactgactctctccacacctcagcgagcgagagcgcg
aatgacgagggcggggagggggagtatgtcaacttgtactcatccagccaggccaatggg
gagctgcctctctccctcagagaaacgattgctgctgacgatgttcttcaagaccccacc
cctcaaatgccatccaccaatagcaaagaggctgtggacaaggaaaggaggcagaagtca
acagagtctgctggcagcgatgaggaagatgtggacgaactctccctcatagaccacaag
gagattatgaacaggataacactaaaacaagagaatgacgatggccctgatgttcgtgct
ggatcaggagatattctattagtccacgctacagaaacggaccgcaaagatcttgttttg
tactgtgaagcctttctgactacatataggacttttataacccccgaggacctcattaag
aagctacactacagatataccaggttctgccacagtccagacaccttcaagaagcgagtc
agcaagaacacattctttgtgctggttcgtgtggtggatgagttgtgcctggtggagctg
acagaggacatcttgaaacagctgatggacctggtgttcacgctggtgtgcaatggcgag
ctcagcctcgcccgtgtgctccgcaagaacatcctggataaggtggagcagaagaagctg
ctgcgctacactaactccctcaagcccctcgcagcccgaggggtctctgcaaggcctgga
actcttcacgacttccgcagtcatgagattgctgatcagctcactcttcttgatgctgaa
ctcttctataaaatagagattcccgaagtgctgctttgggccaaggagcagaatgaggag
aagagtccaaacctgactcagttcacagagcactttaacaacatgagctattgggtccgc
tctttgataattcagcaggagaaggcccaagacagagagaagctgctcctcaaattcatc
aagataatgaagcacttaagaaagttgaataatttcaactcctacctggcaatactgtcc
gccttggactctgcccccatcaggagactggagtggcagaaacagacctcagagggattg
gaggaatattgcacgttgatcgacagctcctcctccttcagagcatacagagctgctctg
gctgaagtggagcctccgtgtatcccgtacctgggtctcatcctccaggacttgaccttc
gtccacctggggaaccccgacctcatcgacggaaaggtcaatttctccaaacgctggcag
cagttcaacatcttggacagcatgcgccgcttccagcaagtgcattacgagctgaagcgc
aacgaagacatcgtctccttcttcaatgacttcagtgaccacctcgcagaggaggccctg
tgggagctgtcgctgaagatcaagccgcggaacatcgccaggcgcaagacggaccgcgag
gagaagacctag
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