Lates calcarifer (barramundi perch): 108873984
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Entry
108873984 CDS
T04895
Symbol
lrrc8aa
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Aa
KO
K22038
volume-regulated anion channel
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108873984 (lrrc8aa)
Ion channels [BR:
lcf04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
108873984 (lrrc8aa)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_At5g56370
LRR_LRWD1
Sp-CxC
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
108873984
NCBI-ProteinID:
XP_018517821
UniProt:
A0A4W6BQG3
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Position
LG9:complement(15282288..15296780)
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AA seq
796 aa
AA seq
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MIPITELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
VNRSCETMPVPNMTTPYVLEPKGIQYDLDRHQYNYVDAVCYENELHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPPGKMNGSM
DKKASCVSEDVEASVPMLQRTKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKKFRIHV
EEGDIVYRLYIRQTIIKVIKFILIISYTAYYVHYIRFSVVCAVNLQKLTGYSTFSCAHPL
ATLFKILACFYISLVVVYGLICMYTLCWMLSRSLKRYSFESIREESSYSDIPDVKNDFAF
MLHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQDKLELHLFM
LSGIPDTVFDLIELEVLKLELIPDVTIPPIIAQLSNLREMWLYHTPAKIEAPALAFLREN
LKSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSN
LTKLPQVVTDVGVHLQKLSINNEGTKLMVLNSLKKMVNLTELELVRCDLERIPHSIFSLH
NLQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLTNLERLYLNRNKI
EKIPSQLFFCRKLRFLDLSHNNLTSIHADVGFLQNLQYFAVTANRIETLPPELFQCKKLR
TLNLGNNCLQTLPSRFGELTGLTQLELRGNRLECLPVELGECRLLKRSSLVVEEDLFNTL
PSEVKEQLWRADKEQA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatcacagagctccggtactttgctgacacccagccagcgtaccgtatcctg
aagccatggtgggatgttttcaccgactacatctcaatcgtcatgctgatgattgcagtg
ttcggtggcacactgcaggtcacgcaggacaagatgatctgcctgccttgcaagtgggtg
gtcaacaggtcatgcgagaccatgcccgtcccaaacatgaccaccccctatgtacttgaa
cccaaaggcattcagtatgacctcgaccgccatcagtataattatgttgacgctgtctgc
tacgagaatgaactgcactggtttgccaaatatttcccctatctggtgctactccacacc
ctcatcttcctggcctgcagcaacttctggttcaagtttccccgcacaagctctaaactg
gagcattttgtctccattctcctcaagtgctttgactccccatggacaacaagggctttg
tctgagaccgtggtggaggagagcgaccccaaacctccgggaaaaatgaacggttcaatg
gacaagaaggcctcatgtgtgagtgaggacgttgaagctagcgtgcccatgcttcaacga
acaaagtccagaatcgagcaaggaattgtagatcgctctgaaactggggttttagataaa
aaagaaggggagcaagctaaggccctttttgagaaagtgaagaagttcaggatccacgta
gaggagggtgatatagtctaccgtctttacatacgccagaccatcatcaaagtaatcaag
tttattctgataattagctacacagcctactatgtacactacatcaggttcagtgtagtg
tgtgcggtgaaccttcagaagctaacagggtacagcacgttctcttgtgcccacccgtta
gcaacacttttcaagattctggcctgtttctacatcagcttagtagtggtttatggtctt
atctgcatgtacactctgtgctggatgctcagccgctccctcaaaagatattcctttgaa
tcaatccgggaggagagcagctatagtgacattcctgacgtgaagaatgactttgctttc
atgctacacatgatagatcagtatgaccctctctactccaagcgctttgcagtttttctg
tcagaggtgagtgagaacaagctgaggcagctgaacctgaacaacgagtggacgctggaa
aagctaaggcagcgcatcactaagaactcccaggataagctggagctgcatctgttcatg
ctcagtgggatcccagacacagtatttgatctgatagagctcgaagtgctcaagctggag
cttatcccagacgtaactatcccgccaatcatcgcccagctttccaacctgagagagatg
tggctctatcacacaccggctaaaattgaggctccagctctggctttcctgagggagaac
ctgaagtctctccacatcaagttcaccgacatcaaggagatccccctttggatctacagc
ctgaagaacctcagtgagttgcacctaaccgggaaccttagtgccgagaacaatcgttac
atcgtcattgacgggctcagagagctcaaaaggctcaaagtgctacgtctgaaaagcaac
ctgaccaagctgccgcaggtagtgacggatgtgggcgtccacctccagaagctctccatc
aacaatgagggcaccaagctgatggtgctcaacagcctgaagaaaatggtcaacctgaca
gagcttgagctcgtccgctgcgatctcgaacgcatccctcactccatcttcagtttgcac
aacctgcaggagatcgacctgaaggacaacaatctgaagacaatagaggagatcatcagc
ttccagcacctgcaccggctcgtgtgcctgaagctttggtacaaccagattgcctacatt
cccattcagatcggaacactcaccaacctggagaggctgtatctaaacagaaacaagatt
gagaaaatccccagccagcttttcttctgccgcaagctacgctttttagacctgagtcac
aacaatctgaccagcatccacgccgatgtaggcttcctccagaacctgcaatactttgct
gtgacagcaaacaggatcgagactttgccccctgagctcttccagtgtaagaagctgcgt
actctgaatctgggcaataactgcctgcagacgctgccatcacgcttcggagaactcacc
ggcttgacccagctggagctgagagggaaccgtctagagtgtctccctgtggaactcggc
gagtgtcggctgttgaagaggagcagtctggtggtggaggaggacctgttcaacacgctg
ccatcagaagtcaaagaacagctttggagggctgataaggagcaagcttga
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