Lates calcarifer (barramundi perch): 108874009
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Entry
108874009 CDS
T04895
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108874009 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108874009 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lcf04091
]
108874009 (lman1)
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
108874009 (lman1)
Lectins [BR:
lcf04091
]
L-type lectins
108874009 (lman1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
GCN5L1
APG6_N
Motif
Other DBs
NCBI-GeneID:
108874009
NCBI-ProteinID:
XP_018517864
UniProt:
A0AAJ7PCR3
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Position
LG9:complement(13923439..13934910)
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AA seq
516 aa
AA seq
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MAVSIVRRPVANAVMLILTFLATLLFHRSFADIAAGASTSEETPHRRFEYKYSFKGPHLA
QTDGSIPFWIHTGNAIPSADQVRITPSLRSQRGSVWTKNKVNFEHWEAEVTFRVSGRGRM
GADGLAVWFTTSQGLDGPVYGAADRWNGVGVFFDSFDNDGKKNNPAIIVVGNNGNLVYDH
QNDGTTQALGTCLRDFRNKPYPVRAKITYYKQTLTVMINNGFTPDKEDYEFCTKVDNMVI
PAEGFFGISAATGGLADDHDVLSFLLFRLTEPGQQPPPPESEIPKEEKDKYQEEFQNFQQ
ELDKKKEEFQKEHPDVQGEPIEDLYESVNDREIRQVFEGQNRIHLEIKQLHRQLAMILDE
QRRYVSVITDEISKKGTNAESGQVDSASPQLGSVLATQQEVLRNLNELRNSFHESLKQIG
SAQHQGNAAGMGTYETIQHFNDIKEHLHTVKRDVEHLVQRNAQNPAEKIMKCPEVPAMPS
CLSTVHFAIFIVVQSVLFFCYIMYKSQQEAAAKKFF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatagtgcggcgcccggttgccaatgctgttatgttgatattaactttt
ctcgcaacgttactattccaccgcagtttcgccgatattgccgcaggtgcctcgacgtca
gaagagacgcctcaccgccggtttgagtacaaatacagcttcaaaggaccgcacctggct
cagacagacggcagtatccccttttggatccacactggaaatgctattcctagtgcagac
caggtgcggattacaccatccctcaggagtcagaggggctctgtgtggacaaaaaacaaa
gtcaactttgaacactgggaggctgaggtgaccttcagagtatctggaagaggcagaatg
ggagcagacggtttggctgtgtggttcacaacttcgcaaggcctcgacggtccagtgtat
ggagccgccgaccggtggaatggagttggagttttctttgactcttttgacaatgatgga
aagaaaaataacccagccataattgttgtgggaaacaatggcaaccttgtttatgaccat
caaaatgatggcaccacacaggcccttggcacatgtttacgagacttccgcaacaaacca
tatcccgtccgagccaaaataacctactacaagcagacactgacggtgatgatcaacaac
ggtttcactccagacaaagaggactatgagttctgcacaaaggtggacaacatggtgatt
cccgctgagggcttctttggcatctcagctgccactggtggtctagcagatgaccacgat
gtgttgtccttcttgttattcagactcacagagccaggccagcaaccgcccccacctgaa
tctgagattcctaaagaagagaaggacaagtaccaggaggaatttcagaacttccagcaa
gagctcgacaaaaagaaagaggagtttcagaaagagcacccagacgtccaaggagagcca
atcgaggacttgtacgagagcgtgaatgaccgagagatacgtcaggtgtttgaaggccag
aaccggatccatctggagatcaaacagctccaccggcaactagctatgatcctggacgag
cagcgcagatacgtctctgttatcactgatgagatttccaagaaggggacgaacgccgag
tcaggacaggtggattctgccagtccccagttgggctctgtcttagccacccagcaggag
gtgctcagaaacctgaacgagctgagaaactcctttcatgagtctctgaaacagatcggc
tcagcccagcaccagggaaatgcagctggtatgggaacatatgagaccattcagcacttc
aatgacatcaaggaacatctgcacacagtcaaaagggacgtggagcacttggtgcagcgt
aatgctcagaatcctgctgagaagatcatgaagtgccctgaggtgcctgcaatgccttcc
tgcttatccactgttcattttgcaatcttcatcgtcgtccagtcagtcctgttcttctgc
tacatcatgtacaaaagtcaacaagaagctgcagcaaagaagttcttttga
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