Lates calcarifer (barramundi perch): 108874016 Help Entry 108874016         CDS       T04895                                  Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:lcf00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     108874016  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lcf03019]     108874016 Messenger RNA biogenesis [BR:lcf03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      108874016 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup192 Nup188_SH3-like Motif Other DBs NCBI-GeneID:  108874016 NCBI-ProteinID:  XP_018517881 UniProt:  A0A4W6BQN3 LinkDB All DBs Position LG9:complement(15256657..15272102) Genome browser AA seq 1751 aa AA seqDB search MAGRKMAESEMSVRSCRELWTILLGRSALREPAQIEAELDRHWDRLHQGLGYYKPPSSSS AGKVKENKDVAQPLKDFGLRISKLLGLDEQQSVQLLQCYLQEDYRGTRDSLKVVLKDERQ SQALLLKIADYYYEERMCLLRCVLLLLTYFQDERHPYRTEYCNCVNKLEKDLVSSYQSQF ESLFKAEAPTWETHGNLMTERQVSRWFLQCLREQSLLLEIIFLYYAYFEMSPSDLLSFTK IFKEQGFGLRQTNRHLVDKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTEQHQFS NAPDVIKEMDQLLLTFGDIPHHGPVLLAWVLLRHTLRPDESNPVIRRIGNTALQLGVFKY LSTMLKGLGVSGNNCTASTAKMCIYGLLSFVITSFEEESLQTDGVATQCSHLIDAACEVL SAPSLAEVFWEMKPNMGLGMILDSAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKM SFYTQVYKHKPNDIISKDDETLWRRQTPKLLYPLGTGQTNLWMPQGVLGQVMIGGDQGYV VRWDYSYSSWTLFTCEVEMLLHVVSTADVIAHCARVKPILDLVHKIISTDWTVSDCLLPL TSRIYMLLQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTSM AQCISAEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLITTLVKGQLGSTQNKGLIPCVLL VLKEMLPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSMPTLQSLCIYSLAN TEAGQAVVNIMGVGVDTIDVVLAAQPSSCGSEGPGQILIQTVKLAFSVTNNVIRLKPPSD VVSPLEQALTQHSGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGS DAAAIRDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGNEGSKEFL LGEWSCLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRTKERFWEN LTTPLFGTLTPPSDTTEPCVLETCAFVMKIIGLEIYYVVSGSLEQSLKDGLQKFANARRY EYWSQYVKSLVCHVAEMEEEGICYFPETQMLISAWRMLLILSTSHSDVMQLTDDSTKLKL FMDVLDGAKATLTTPMSVPCLRLGSMMATLLLILLKQWRGVVATAPDILSPLSLILESVL QADQQMMERTKAKIFSALISVLQIQGLNGGDISQLPQLLLSVCETVKDEALALIDNTRHM SQVGDTTEDEDSMETDSPRGPQKDQRDGVCVLALHLAKELCRTDEDGEHWVSVMRKVPVL PSVLSAVELSLRSKHNLYFTEAALHLLLTLARSPQGAAAVAGAGVIQTICLPLLSVYEVS SNGASQSFSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCLN AVRTVQSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDVQVNLCYLCQTCTYLLHSK KMLHHYLQAKNGEALPPAPLPRTQRPPQTPSKEAAGGGEREEVEQKALLAVQCSLLKILS KTLATLQHFTPDCCQILLDQCMDLAEYRTLFVLSFTTPAFDPDVPPSFGTLLATINVALS MLSEMEKKKEPVSLSIVSLASSEEIQALKSLLMFTMENCFYVLISQAVRCLKDPSILPRD KQRLKQELSSELSTLLSSLSRHFRRGSPSSPASGILPSTQSKPPTPGSKASHEGQEPFIQ LVQAFVRLVQR NT seq 5256 nt NT seq  +upstreamnt  +downstreamnt atggcaggaagaaagatggcggaatcagagatgagtgtcaggagctgtcgagaattatgg accattctgctgggaagatctgcattgagagagccggctcagatagaggcagagcttgac agacactgggacagactgcatcaaggactcggttactacaaaccacccagctcatcttct gctgggaaagtgaaggagaacaaagatgttgcacaaccattgaaggattttggtctgagg atcagcaaactgttgggtcttgatgagcagcagagcgtgcagcttttacagtgctaccta caggaggattacagaggaacccgtgattcattaaaggttgttctcaaggatgagcgacaa agccaggcactgctattgaagatagcggactattactatgaggagcggatgtgcctgctc agatgtgtcctcctcttgctgacatactttcaggatgagcgacatccctacaggacggag tactgtaactgtgtcaataaactggaaaaggaccttgtgagcagctaccagtcacagttt gagagcctttttaaagcagaagcaccaacatgggaaactcacggcaacctgatgacggag aggcaggtgtcacgatggtttctgcagtgtctgagagaacagtctctgctgctggagatc atcttcctgtattatgcttactttgagatgagcccatccgacctgctgagcttcacaaag atattcaaggagcagggctttggtttgcggcagaccaacagacacttagtagacaaaagc atggatgcgttggttgaccgtatcggatatttgagctctctcatcctggttgagggaatg gacatagacttcctgcacaagtgtgccctggaagactgtacagagcagcatcagttctcc aatgctcctgatgtcatcaaggagatggatcagctgctgctgacattcggtgacatccct catcacgggccggtgctgctggcttgggtcctcctgagacacacactgagaccagacgag tctaaccccgtgatcaggaggattggcaacaccgccctgcagctcggggtgttcaagtac ctttcaaccatgctgaaaggccttggagtctcagggaataactgcacggcaagcacagca aagatgtgtatttatggactcctctcatttgtgatcacctcttttgaagaagaaagccta cagactgacggtgtggcgacgcagtgctcccacctgatcgatgctgcttgcgaggtcctc tctgctcccagtcttgctgaagtcttctgggaaatgaaaccgaacatgggattgggaatg atcctggacagtgcagtcgggatgttccctcataagattggaccactgttacaacttcta actgcacttctctcaaacaagtcgacggttaaaaaggtgtacaactttttggataagatg tccttctacacacaagtttacaaacataaacccaatgatatcatctccaaggatgatgag acgctgtggaggagacaaacaccaaaactcctctaccctctcggcacagggcagactaac ctgtggatgcctcagggagtgctaggccaggtgatgattggaggtgaccagggctatgtg gtgcgctgggactactcctacagctcctggactctcttcacctgtgaggtggagatgctg ctccacgttgtttcaactgcagatgttatagctcactgtgcacgtgtgaagcccatcctg gatctggttcataagatcataagcacagactggactgtatcagactgtttactgcctctc acttcacgcatctacatgttgcttcagagattaacgtcagtcatcaaccctccagtggac gtgattgcctcctgtgtgaactgcctctctgttctggctgcaaggatgcctgggaaggtg tggtccagtctacaccacactggtttcctgccctttgcttccaaccctttgaccagcatg gctcagtgcataagtgccgaggggatgaaagcaggtaactatggcaacctgttggttcag attgaacagccaaggggggagtacgctgtgaccatcgccttccttcgtctcattacaacc ctggtcaagggtcagcttggcagcactcagaacaaaggcctgatcccctgtgtgctgctg gtgctaaaggagatgctgcccacgtaccataaatggcgctacaacacctacggagtcagg gagaggataggttgtctcattttggagctgatacatgctattctcaatctgagcccagag ggggaagaccagggcagcatgcccaccctgcagtctctgtgcatctacagcctggcaaac actgaggctggacaggcagtcgtcaatatcatgggagttggcgtggacaccatagatgtg gtcctggctgcacagcccagcagctgtggctccgagggtcccggtcagatcctgatccag actgtcaaactggccttctctgtcacaaacaatgtcatccgtctgaagccaccatctgac gtcgtgtcccctctggagcaggccctgacacagcacagtggtcatggcaacaacctcata gttgtcctggccaagtatatttaccacaaacatgaccctgcactgcctcgcctcgcaatc cagctgctcaaaagactcgctacagtggctcccatgtcagtctatgcctgccttggcagt gacgcagcagccatccgggatgcattcctcactcggctgcagagcaaaaccgaagacatg aggatcaaggtcatgatccttgaatttctcactgttgctgtggaaacccagcctggcctc attgagctttttcttaacctggaagtcaaagatggcaacgaggggtcaaaggagtttctt cttggtgagtggagctgtcttcatgtggtgttggacctgatcgactccaaacagcagggg aaatactggtgtcccccactgctccaccgtgccgccctggccttccttctcgctctctgg caggatcgtagagacagtgccatctctgtcttacgtaccaaagagcggttttgggagaat ttgacaacacctctctttggaaccctcactccaccctcagacaccacagagccttgtgtt ctggagacatgtgcttttgtcatgaaaatcattggcctggagatctactatgttgtcagt ggctccttagagcagtctctgaaggacgggctgcagaagtttgccaatgcacgacgatat gaatactggtcccagtatgtcaagtctctggtgtgccacgtggcagagatggaggaggaa ggcatctgttatttcccagagacccagatgttgatctctgcctggcggatgctgctaatt ctttccactagccattctgatgtgatgcagctaacagatgactcgaccaagctgaagctt ttcatggacgtcctggatggagctaaagccactctgacgacacccatgtctgtgccttgt cttcgtctggggtccatgatggccacgctgctactcatcctcctcaaacaatggagaggt gtggtagcaacagctcctgacatcctgtctcccctctccctgatcctggagagtgtcctg caagctgaccagcagatgatggagaggaccaaggccaaaatcttctctgcactcatttct gtgctgcagattcagggactcaacggtggagatatttcccagctgccccagctgttgctg tccgtgtgtgagacggtgaaagacgaggccctggcgcttattgacaatactcgccacatg agccaggtgggagacacaacagaggacgaggacagcatggagacagattctccccgcggc ccacagaaggaccagagagatggggtgtgtgtgctggcgctgcacttggcaaaggagctg tgtcgcaccgatgaggacggtgagcactgggtgtcagtgatgaggaaggttccagtcctc ccctcagtgctcagcgctgtagagctcagcctgcgctccaaacacaacctctacttcacc gaggccgcacttcacctgctgctcacactggctcgctctccacagggggcagcagctgtt gctggagcaggagtcatccaaactatctgcctccctcttctgagtgtatatgaggtgtct tcgaatggggcatcacagagtttctcccgtaagtcccaggactccgcctgctggccgggt gtgtaccgtctctgcatgtctttaatggagagtctgctcaagactctgcgctacaacttc atcaatgaggccctggactttgttggagttcatcaagaaaggatactacagtgcttgaac gcggtgcgaacagtgcagagcctggcatgtctggacgaggccgaccacacggttggcttc ctgctgcagctctccagcttctgtaaggagtggcagtttcacctgcccaaactgctccgc gatgtacaggtaaacctgtgttatctgtgtcagacctgcacgtatctgctccacagcaag aagatgcttcatcactacctccaggctaaaaacggtgaggcgttgccccctgctccactc cccaggacacagcggcccccacagaccccgtctaaagaggcagcgggtggaggggagagg gaggaggtcgagcagaaggccctgctggctgtgcagtgcagtcttctgaagatcctcagt aaaactctggcaaccctgcagcacttcactccagactgctgccagatactcctggaccag tgtatggacttggcagagtacaggaccctgtttgtgctcagtttcacaactccggcattt gaccctgatgtgcctccttcatttggaaccctgctggccaccatcaacgtggccctgagc atgttgagcgagatggagaagaagaaagaaccagtttccttgagcatagtctcgctagct tcatcagaggagatccaggctctaaagtcattgctgatgttcaccatggagaactgtttc tacgtcctcatctctcaggctgttcggtgtctcaaagatccctccattctccctcgagac aaacagaggctcaaacaggagctcagctctgaactgagcactcttctctcgagcctgtcc cgccacttccgcagaggttctccatcctctccagccagcggcatcctcccctccacccag tccaaaccgcccacaccaggctccaaagcaagccatgaaggtcaggagccgttcatccaa cttgttcaggcgtttgtcagacttgtgcaaagatag

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