KEGG   Lates calcarifer (barramundi perch): 108874046
Entry
108874046         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 1
  KO
K15184  AF4/FMR2 family member 1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108874046
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108874046
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 108874046
NCBI-ProteinID: XP_018517925
UniProt: A0AAJ7LA27
LinkDB
Position
LG9:complement(14347792..14369743)
AA seq 1223 aa
MTANFGCCERRTMASQPSVYNEDRNLLRLRAWEQRIQETSQAKELNPDNVPLFGEPYKTN
KGDELSNRIQRMLGSYEDVNNPCPLTVEPLPVPSYATLSQSDQGQPNTDKSTKAPFHNQV
HHMSTQNQKCSSSNSHSSQPMRTSAASSPNQHGHSSTFPKPSLNHSQGGQPGNSARQQKM
SEAFSDLRERVSLPQEMSAQSPDVKPLPFLHSSNHDNTDLDTKDTFDRYQLQESSDHPSE
SASTTDVSMLNIKQSPKDAPLTHATKANVLPSQTFPPLLSSKQPSVVMTQKPTAYVRPMD
GQDQVVSESPELKPSPEPYVPLPELISKSNPGKMKILPQFLETRTNEAQCVEDILREMTH
SWPPLLTAIHTPSTDAPSKSPFPAKEAEHVSSCLEQKSYDSAPPPTDPSQLNQPSASSSF
EAAHSSGVESASSSDSESSSRSESDSESTTEEPPEPPVSISLKTEPDAPAVSDWQLGNWI
RSNQQNSSTESQGGTHVTGSPTHKQLLPTQSSKHSSVEVVDPARESMPQLSSHQKELSEN
LAKPQQCRESPQDNCCQQSSQKSPSADFRKLSCNMHPSKPAKEGCPDHSDTAVSVKCEEI
VATRDKDPCFTDRPRVKTKTKHCKKSKSSSDSKQDRKRTYKHTSLDKRKAGSEPEATPVV
NGHCPSCGVRYPNPCSCPTQSPSLQRDQSSPAPPLRIDCSKPKAETCRRGTKRPHKTTYK
HSEKTANTTKGSRNLHRPPRSLLVKIDLSLLSRVPQMPGNHQEIPSNGKRSALAVEQDGG
GGDAPTTHKHSKTSKKSIPPNVEVDNKSLPRKKPRLENKNTSSAHVSVKLESSSNPAEEQ
ERKRAKKNPVSMQQPATPKDTAKDSKVHKRCSGETQESSKKTVKSKNSCKHKKRSVKNTE
HPHSEKQKPPNSSLAVPSSSQSNKEVLINRPLLKFEDRQYPVKHYIKEAKRLKHKADAES
DKLSKAFNYLDAAMFFVESGIAMEKDPQISMSSYTMFAETVELLKFVLKLKNSVDPSAPP
SEKDFLALCLKCQSLLQMAMFRHKHKTALKYSKTLNDHFTNSAQATHDPSVCLSKVTDTP
SPMPDMPSPANTSTSSCPGSNHSGSGLAVGPVGSTVAVPQAIEQVAFTYVKITTLFLSAH
DIWEQAEELAHKGSGMLTELDIGYGPTEPCLNNELYGPLYKTGCPLAETGQPKGKMTNIL
LPLLDACKPSMLLLPALTSLQRV
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgacagccaactttggttgttgtgagaggcgcaccatggcatctcagccaagtgtatac
aatgaagacaggaaccttcttcgcctccgagcatgggaacagaggatccaagaaaccagc
caagccaaagaactcaaccctgataatgtgccactctttggggaaccatacaagacaaac
aaaggggatgagctttccaatcgaatccagaggatgctgggcagttatgaagatgtgaat
aatccctgtcctcttactgttgagccattgcccgttccttcttatgcaaccctctcacag
tcagatcagggtcagccaaacacagataaatcaaccaaagctccattccacaaccaggtc
catcacatgtcaacgcaaaaccagaaatgctcctctagtaacagtcactcctctcagccc
atgaggacgtcagctgcctcttctcccaaccaacatggacattcatccacttttccaaag
ccttctttgaaccacagtcagggcggtcaacctggaaactcagcacgtcaacaaaagatg
agtgaggccttctcagatctcagggagcgtgtcagccttccccaggaaatgtctgctcag
tctcctgatgttaagccactacccttcctacattccagtaaccatgataacactgacttg
gacactaaggacacctttgatagatatcagcttcaggagtcttcagatcacccatctgag
tctgccagcaccacggacgtttccatgttgaacattaagcagtctccgaaagatgcacct
ttgacccatgccaccaaggctaacgtgctaccctcccagaccttccctccactcctgtca
tcgaagcagcccagtgtagtcatgacccagaagccaacagcctatgtgcgacccatggat
ggtcaggaccaggtggtcagcgagtcacctgagctaaagccttcaccagagccatatgta
ccactaccagagttaatcagcaagtccaacccgggcaaaatgaagatactgccacagttt
ttggagacgaggacgaatgaagctcagtgtgtcgaagacatcttgagggaaatgactcac
tcctggccccctcttctaacagctatacacacacctagcacagatgcaccctccaagtcc
ccattcccagctaaggaagcagagcatgtctcatcatgtctggaacaaaaaagctatgac
tctgctcctcctcctacagatccatcccagcttaaccagccaagcgcctcatcttcattt
gaagcagcacattccagcggggtagagtccgccagctccagcgactcagagagtagctca
agatcagagtcggacagcgaaagcaccacagaggagccacctgaacccccagtgagcatc
tcacttaaaacggagcctgatgctccagcagtgagtgactggcagttggggaactggatc
aggtccaaccaacagaactcgagcactgaaagccaaggcggtactcatgtcaccgggagc
cccactcacaaacagctactgcccactcaaagctccaagcactccagtgtagaggtggtt
gaccctgccagggagtccatgcctcagctttcttctcaccaaaaagagctcagcgaaaat
cttgccaaaccccagcagtgcagagaaagccctcaggacaactgttgccagcagagtagc
caaaaatccccttccgctgatttcaggaaactgtcatgcaatatgcacccctcaaaacca
gcaaaggaaggctgcccagatcacagtgacacagctgtcagtgttaagtgtgaggaaatc
gtagccacaagagacaaagacccgtgtttcacagataggcccagggtaaagacgaaaaca
aaacactgcaagaaaagcaagagcagcagtgactctaaacaagacagaaaacgaacttat
aaacacacgtctcttgacaagcggaaggctggatcagagcctgaagccacgccagtcgtg
aacggtcattgtccatcttgtggcgtgagatatcctaacccctgctcctgccccacccag
agtccttctctgcagcgtgaccagtcttctcctgccccaccactaagaatcgactgtagc
aaacccaaggcagagacctgcaggaggggcaccaagaggcctcacaaaacaacctacaag
cactctgagaagaccgcgaatacaaccaagggttctcggaacctccacaggcctcccaga
tccctgctggtgaagatcgatctaagtctgctctcaagagtcccccagatgcctggcaac
caccaggagatacccagcaatggaaagagatctgcactggctgtagagcaagatggagga
gggggtgacgctcctacaacacacaaacacagcaaaaccagcaaaaagagcatacctcca
aatgttgaggtagacaataaaagtctccccaggaagaaaccaaggctggaaaacaagaat
acctcatcagctcatgtgtctgtcaaactggaaagttccagcaatccagcagaggagcag
gagagaaagagggccaagaaaaatcctgtatctatgcagcagcctgcaacacccaaagac
actgctaaagactcaaaggtacacaaacgctgttcaggggagacccaggagtccagtaag
aagactgtaaagagcaagaactcctgcaagcacaagaagaggagtgtaaaaaacacagag
cacccacactctgaaaagcagaaacctcctaatagcagccttgccgtcccatcatcttca
cagtccaacaaagaagtattgatcaacaggcctttgctcaagtttgaggacaggcagtat
ccagtgaagcattacataaaggaggccaaaagactgaagcacaaagcagatgcagagtca
gataagctcagtaaagctttcaactacctggatgcggccatgttctttgttgagagtggc
atcgccatggaaaaagatccacagatttcaatgtcttcctacactatgtttgcagagaca
gtggagctcctcaagtttgtgctgaaacttaaaaactctgtggacccttctgctccaccc
tcagaaaaggactttttagctttatgtttgaagtgccagtctctcctgcagatggccatg
tttcgccataaacacaaaactgcactcaagtattcaaagaccctcaatgatcacttcact
aactctgctcaggcaacacacgatccttctgtttgcttatcaaaagttacagacaccccg
tcccccatgccggacatgccgtctccagccaacacatccaccagctcatgtcctggctcc
aaccacagtggtagcgggttggctgtgggccctgttggcagcactgtggccgttccccag
gccatcgaacaagtggcattcacctacgtcaaaatcactacgttattcttgagcgcgcat
gacatctgggagcaggcggaggaactggcacacaaaggcagcggtatgctgacagagctg
gacatcggttatgggcccactgagccttgcctcaacaatgagctctatggtccgttatac
aagacagggtgtccactggctgagactggacagccaaaaggtaaaatgaccaacatcctg
ctcccgttactggacgcctgcaaaccctccatgctgcttctccctgccttgacttcactt
cagcgtgtttaa

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