KEGG   Lates calcarifer (barramundi perch): 108874062
Entry
108874062         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcf03009]
    108874062
Ribosome biogenesis [BR:lcf03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    108874062
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd EIF3I NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_DCAF12 WDR54 KNTC1_N
Other DBs
NCBI-GeneID: 108874062
NCBI-ProteinID: XP_018517957
UniProt: A0AAJ7LBL7
LinkDB
Position
Unknown
AA seq 430 aa
MAAPLEVIVTSDSGSQLWNSTVFDLHSGSSLLSYRGGNSSARTLAVLRGEFLLSAQLGKN
FINVWEIQRKDQLQQKIVCPGVVTCLTASPNGLFLAAGVAEAIYLWEVCTGKLLSVLSRH
YQDVTCLKFTDDSSHFVSGGKDNLALVWSLCSVIQLDLSHTPEPRHVLSRHSLPITDLHC
GLMGAQARVATASLDQTVKVWELSSGELLLSVLFDMEIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSQSLSRDKSFQSDNDGNQVFKGHRNLVTCLSVSMDGTLLASGSHDETVRLWDIQS
KQSIRCLTHKGPVTNATIMAAPANMFLPDSRPAVPLPRFSRHLHASEVDAGESGEVCVRL
GLCTQEEEETYLQKADRLNSLMNAVTDKSVFGDGENTKVRVAELEEEVQTLKKINKDLYD
FSSQLLTKPT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcggctcctctggaggtgatagtgaccagtgactccggctctcagctgtggaacagc
accgtgttcgacctccacagcggctccagcctgctctcttaccggggagggaacagctcg
gcccggacactcgccgttctccgcggggagttcctgctctccgcccagctcggcaagaac
ttcatcaacgtctgggagatccagaggaaggatcagctgcagcagaagattgtgtgtcca
ggtgttgtcacctgtctgactgcttcacctaatggactcttcctggctgctggagttgct
gaagccatttacctgtgggaggtgtgcacaggtaagctgctgtctgtcctcagtcgtcac
taccaggatgtcacctgtttgaagttcacagacgacagcagccattttgtttctggagga
aaagacaacctggctctggtttggagtctgtgcagtgtgatccagcttgatttaagccat
acccccgagcctcgccacgtcctgtcccgtcactctctaccaatcacagacctgcactgt
ggcctgatgggagctcaggccagggtcgccaccgcctccttagaccagaccgtcaaggtg
tgggagctgtcctcaggtgagctgctcctgtccgtcctgtttgacatggagatcatgtct
gtgacctttgacccgtgcgagtacttcctgttctgtggaggaagtgacggcaacattttc
caggtgtctctgtgcagccagagtctcagccgggacaaatcgttccagtccgacaacgat
ggaaaccaggtcttcaaggggcacaggaacctggtgacttgtctatcggtgtcaatggat
gggacgctgcttgcctctgggtcacatgatgagacggttcgactctgggatatccaaagc
aaacagagcatccgctgcctcacccacaaaggtccggtgacgaatgccaccatcatggcg
gctccggctaacatgttcctgcctgacagtcggcccgctgtccctcttccgcgcttcagc
cgacacctgcacgcctccgaggtcgacgccggagagtcaggagaggtttgtgtccggctc
ggtctctgcacacaggaggaagaggagacatacctccagaaagctgataggctgaactct
ctgatgaacgctgtgactgacaagtcggtgttcggtgacggtgaaaacacaaaggttcga
gtcgcagagttggaagaagaagttcagactctgaaaaaaatcaacaaggatctgtacgac
ttctccagccagctgctcacaaagcccacataa

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