KEGG   Lates calcarifer (barramundi perch): 108874063
Entry
108874063         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type 13
  KO
K02374  tyrosine-protein phosphatase non-receptor type 13
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108874063
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108874063
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Non-receptor PTPs
    108874063
SSDB
Motif
Pfam: PDZ Y_phosphatase PTN13_u3 PDZ_6 FERM_M PDZ_2 FERM_N FERM_C Tc-R-P KIND DSPc PTP-SAK PTPlike_phytase PTP-NADK SNX17-27-31_F1_FERM
Other DBs
NCBI-GeneID: 108874063
NCBI-ProteinID: XP_050928891
UniProt: A0AAJ8B9T5
LinkDB
Position
LG9:14264103..14309056
AA seq 2570 aa
MHVSLAEALEVRGGPLQEEEVWAVLSQSAESLQELFHKDPAAMGFIISPWSLLLMPSGNI
SFTDEYVTQQDLRAFTAPEVLGGASLTSVSDIEKMHMYSLGMTLFWGADYEIPQSQPMKL
GEHLNSLLLNMCDDVTLSRMSLRTVLDICSKHIRNSSCDPPFSYIRKLVRLVLGSLSQLD
GLLTDRESLPERSKEIRERLRGKGLPSGRSAAPRVLERYRARTQEQTSLNRGLSRSMGSL
PIQGLLKGDEGAALQYSLSDYPHNSESPTELYPKAPSLHHQHSYPYLHPLHPQQKGRPVE
LDRRSLPFHSGDLGPSQARKSWASSVDLACIDPEALRFGALEDARRGSTALSTHSIGRRK
SPLRASRERDSRYPEFGGLKSRKPHHHSAMSVGSGLPGAYDRIKERQRKLQVLRQAVDDP
VHTHQRYHSDYSSSSESPSVTSSDPDYRQAKKPSEARRYGSQLALSSEHDALSLTSHNTH
RHRQYEGADEGLAGAELLLQKQEEEVQRLQAHLASRLSRANLYSADDPLTPSRTSMLDLR
DPLYTSAVPFRKPKNFHGPEFVKMASEPCVALSVPSSIMKRGKVEEVQRKVGVVLLNGQK
LELSCDIKAVCKDVLDMVVAHIGLVEHHLFGLAYLRENEFFFVDPDAKLSKVAPEGWKED
PKKRKSDVPFNLFLRIKFFLDDVNFIQHAMTKHQYYLQLRKDILEERMRCNTENAMLLAS
LALQAEFSDYQPELHGKTYFRLEHYLPVTVLDKVDQTTIKEELPKLHSNYYGASESEAEF
EFLKVSQRLTEYGVHFHRVLPEKRSQTGIMLGVYSKGVLIFEVLNGNRTPVLRFPWRETK
KISFTKKKICLQNTSDGIKHLFQTDSNKTCQYLLQLCSDQHKFHLQMKARQNNQELQDLE
NSPLSILQYSLGDSVGGTVISGSLAPSLSTRSNPDHLKRISYSEVALNKAPSGPILVQDE
LHFPGFNPAASTVHSNPRIMSRSHHNLGQMPESPEHRAAQSYHGQSHSGLSQPQPNQVAS
HFQQHQRASSDTDSLSQQQDKSFGTVSHGSPVWSLSRSKKESDSSSIEDTGQAYVVGVSM
HSSSGPPSTPASVNDSLKKKLNALPSPEREIATVNLKKDVKYGLGFQVVGGENSGRMDLG
TIISSITPGGPADVNGCLKPGDRLISVNDVNLEGLSHAATIDILQNAPDDVTLVVSQPKE
RLYKESSSGYVPYQSSLKALNPGQRRELDLDTSSEERVGTGSPSPPLHSAGTPSAASSPV
HQHTNLSSQDSKTSSVTKISQPPVNGVQQCLERATAAASAQHQRPEPNVGSDPTPPALPP
KTRKAKVSEAPKVSEHSDWGDSDMDEETYSSSQEKMVKGQKGAAFEYIKENLNGNAPGVN
SLRPGDLFDVELSKKDSSLGISVTGGVNTTVRHGGIYIKAIIPKGAAELDGRIQKGDRVV
AVNGKSLEGATHQRAVEALRDTGQTVHLLLEKGHLPADSVHAPLTPQCTPPCADSDRDQT
KSKEQPHEVKEKPEYSFVTKDNVFDVRLLKNTSGLGFSFSREENIPDEPPGSSMVRVKKL
FPGQPAAESGRINVGDVIMRVNQTPLKGLSQHEVISALRGTGQEVTLLLCRPEPGILPEM
DTSALTPMPSPRKEPLTQVEPSLSIGRATSPPAPQARKSQRPVEEALERLLQKTPGRHNS
YSDSTDGDEEVEEAFSPSTLEHSRQTWERSVYQTPSSNIGMGRFDSTGQMDDTIHSAFYS
PNLSMTRSDLSKRHPSSPVTTDLESSPMHMVSSPSAPSPDPLPPPLPLPLNLTVSGNGQD
VEEFVPEVELKVSLMKSEKGSLGFTLTKGNDHGCYIHDIVQDPAKGDGRLRPGDRMIMVN
DTDVSNMGHTEVVDLVRAAPRVVDLVVGRVLEAPKPPIEAHLLPDICFKGNQEPLGLLLD
GGSDSVYRVLFVKDILPGSLAFEEGSLRPLDLIHYVNGAPTQDLTLSESTRLLELSLDNL
TLKATRDGKPVFPGQKSVSFLNNNIGPKVLSSMNGFLKGEDPRDTECLAALCPLEEEIIK
LDLEKPQSGGLGFSVIGGERGIFVKSITPGGVAESLGQLQVGDRLLKVNDELMTGVSHTK
AVTTIRKAKGLVHLIVSRPPDQNPNTYLAYLPINSDKCNGNTDLSEDSGVKTKLSTPHDE
LKSGSFPPIPPIDYDDGPLEQKRETEHSAEFSEDTDCDGSSLPDDSPESSRKVEWQEESV
DDPRNENYLQMGAGQPDEDEITWGSDELPIENMNSKSRDDGPIITEDELTSLPLVKVVPD
GQYTGPKLNTVVRMMRGLLEQKVPLQEFENLQNLQPLDDCLIGQTKENKKKNRYKNIVPF
DTTRVMLGKDGGYINANFINMPVKDENFMYIACQGPLPTTLGDFWQMVWEQKSNVIAMMT
QEVEGGKVKCQRYWPDTPRTAEMVDDRLQITLIKDQYLDNFVIRLIEVKNVQTNEIQRVT
HLNYTGWPDHGTPTQPEQLLTFISYMRHVHRSGPIITHCSAGIGRSGTLICIDVVLGLIS
KDADFDISDVVRNMRLQRQGMVQTEDQYIFCYQVILYVLRCLQAEENISG
NT seq 7713 nt   +upstreamnt  +downstreamnt
atgcatgtgtctctggcagaagccttggaggtacgtggaggtccactccaggaggaggag
gtctgggcagtgctcagccagagtgcagagagcctccaggagctctttcacaaagaccct
gcagctatgggcttcatcatctccccctggtccctcctgctcatgccctctggcaacatc
tcattcacagatgagtatgtcacccagcaggatttaagagccttcacagctccagaggtc
ctggggggggcctccttgacttcagtctctgacatagagaagatgcacatgtactccctg
gggatgactctgttctggggagcggactacgagatcccccaaagtcagcctatgaagttg
ggggagcacctgaacagcctgcttctcaacatgtgcgatgatgttacattgagtcgaatg
tcgttgcgcacggtgctggacatctgcagcaaacacatccgaaactccagctgtgaccct
cccttctcctatatcagaaaactggtccggttggtactgggtagcctttctcagctggac
ggtctgctgactgatagagagtctcttccggagcgcagtaaggagattcgagagaggctg
aggggcaaaggcctgccctcggggaggagtgccgcccccagggttctggagcgttaccga
gctaggactcaggagcagacgtctcttaacaggggcctcagtcgttccatgggttccctg
ccaattcagggcctgctgaagggggatgagggggcagccctgcagtattccctgtctgac
tatccccacaactctgaatcccccacagaactttaccccaaagcgccctcactccaccac
cagcactcctatccctatctgcaccctcttcacccacagcaaaaaggccggccagtggag
ctggaccggaggtctttacccttccacagtggggacttgggccctagtcaagccaggaaa
tcctgggcttcctctgtggacttggcctgtattgacccagaggctcttcgctttggggca
ttggaggatgcacgaaggggcagcactgccttaagcacccactccataggcaggcgcaaa
tctcccttgcgggcatccagggaaagggattctcgctaccctgagtttggtgggctgaag
agcaggaagcctcatcaccactcagccatgtctgtaggctctggcctccctggtgcctat
gacaggatcaaggagagacagaggaaacttcaagtgcttaggcaagcagtagatgacccg
gtccacacgcaccagaggtaccacagtgattacagttcatccagcgaaagcccctcagtg
acctcctcagatccagactacagacaagctaagaaaccgagcgaagcgaggcgatacggc
tcccagctggcactctcctctgagcacgatgccctgtcgctgacgagtcacaacacacac
agacacaggcagtatgagggggctgacgaaggtctggctggagctgagctgctcctccag
aagcaggaggaggaggtgcagcggctccaggcccacctggccagcaggctgtccagggcc
aacctctactctgcagatgaccccctgaccccatctcgcacttccatgctcgatcttcga
gaccccctctatacctctgctgtaccgttccgcaaacccaagaacttccatgggcctgag
tttgtgaagatggccagcgagccgtgtgttgctttatcggttccctcttcaataatgaaa
cgtggaaaggtggaggaggtgcagaggaaggtgggtgtggtgctgctgaatggccaaaag
ctggagctgagctgtgacatcaaggcagtgtgtaaagacgttcttgatatggtggttgcc
cacatcgggctcgtggagcaccatctctttggccttgcatacctcagagaaaatgagttt
ttcttcgtcgatcctgatgccaaactgtccaaagtggccccagagggatggaaggaggat
cctaagaagaggaaatctgacgtgccttttaatctcttcttacgcatcaaattcttcctt
gatgatgtcaacttcatacagcatgctatgaccaagcatcagtactacctacagctgagg
aaggatatcttggaggagaggatgcgctgtaacacagaaaatgccatgctgcttgcttca
ctggcactgcaggctgaatttagtgactaccagcctgagctccacggaaagacctatttc
agactggagcactacctgccagtgactgtcctggataaggtggaccagacgaccatcaag
gaggagctgccaaaacttcacagcaactactatggagcatccgagtcagaagcagagttt
gaattcctcaaggtgagccagaggctgacagagtatggagtccatttccatcgggtgctt
cctgagaagaggtcccagacaggcatcatgctgggtgtctattccaagggggtgctcatc
tttgaagttcttaacggaaatcgtaccccggtgctaaggttcccctggagggagaccaag
aagatttcctttacaaaaaagaagatttgccttcagaacacgtcggatgggattaagcac
ttgtttcagacagacagcaacaagacgtgtcagtatctgctacagctctgctctgaccag
cacaagttccacctgcagatgaaggcgcgccaaaacaaccaggagctgcaggacctagag
aactcccccctcagcattctacagtattctcttggagactcagtgggggggacagtcatc
tcaggcagcctggcccccagcttatcaacacgctccaacccagaccacctgaagaggatc
tcgtactcagaggtggccctcaacaaggcaccatctggcccaatattagtccaagatgag
cttcactttccgggtttcaatccagcagcctccacggtccattccaacccacggataatg
agccgctcccaccacaaccttggacagatgccagagtccccagagcaccgagcagcacag
tcatatcatggccagtcgcacagtggactgagtcagccgcagcccaaccaagtagcttct
cacttccagcaacaccagcgagccagctcagacacagactccctgtcacaacagcaggac
aagtcatttggtacagtgtcccacggcagcccagtctggagcctcagcaggtctaaaaaa
gaatctgattcttcttccatagaggatactggccaagcatatgtagtaggggtcagtatg
cacagctcctctggcccaccttcaaccccagcctctgttaatgattcactcaagaaaaag
ctcaatgccttgccatctccagagagagaaatcgcaactgtaaacctgaaaaaagatgtg
aaatatggcctgggtttccaggttgtcggaggggagaactctggtcgtatggatcttggt
accatcattagctcaatcactcctgggggtcctgctgatgtcaacggctgtctcaaacct
ggtgaccgactgatctctgtgaatgatgtgaacctggaagggctctctcatgcagccacg
attgatatccttcaaaatgctcctgatgacgttactctggtggtgtcacagcccaaagag
aggctctacaaagaatcctcctcaggctatgtcccctaccagtcttcactgaaggcgctt
aatcctggccaaagacgagaactagaccttgatacctcgtcagaggagcgtgtgggaaca
ggaagccccagccctcctctccacagcgctggcacgccatcagctgcctcctccccagtc
caccagcacaccaacctcagttctcaggactccaagacgagcagtgtcactaaaatcagc
caacccccagtcaatggagttcagcagtgcctagaaagagccacagctgcagccagtgcc
caacatcagagaccagaacctaacgtgggttcggatcctacgccgccggctctgccaccc
aaaactagaaaagctaaagtgtcagaggctcccaaagtttctgagcactctgactggggg
gattcagacatggatgaggagacatattccagtagtcaagagaaaatggtcaaaggtcaa
aaaggtgcagcttttgaatacatcaaggaaaatttaaatggtaatgccccaggggtcaat
agtctccgtccaggagatctatttgacgttgagctgtccaaaaaagacagcagcctgggc
ataagtgtcacggggggagtcaacacaaccgttcgacatggaggcatctacatcaaagcc
atcataccaaaaggtgcagctgagcttgatggaaggatacagaaaggtgaccgggttgtg
gccgtcaatggaaaaagtctggagggggccacccatcagcgagcagtcgaggctctcaga
gacactgggcagacagtgcacttgttgctggagaaggggcatctgcctgcagacagtgtc
cacgctcctctcacacctcagtgcactccaccatgtgccgacagtgaccgagaccagacc
aagagcaaagagcagccacatgaggtcaaagaaaaaccagagtacagctttgttacgaaa
gacaatgtgtttgatgtgcgtctgctgaagaacacatcagggctgggcttcagtttcagc
agagaggagaacatccccgacgagccccccggctccagcatggtgcgcgttaaaaagctg
tttcccggtcaaccagctgcagagagcggtcgcattaacgtgggcgacgtcatcatgcgg
gtcaatcaaacacccctcaaaggactctcacaacatgaggtgatatcagccttgcgaggg
acaggacaggaggtgactttgctcctctgtagacctgaacccggtatacttcctgaaatg
gatacttcagctttgacacccatgccatcaccccgaaaggagccattgacccaggtggag
cccagcctgagcataggcagggcgacctctcctccagctccgcaggccaggaagagtcaa
cgccctgtggaggaggctctagagaggctgctgcaaaaaacccccggcaggcacaacagc
tacagtgacagcacggatggggacgaggaggtggaggaggccttcagcccaagcaccctg
gagcacagcaggcaaacttgggagcggagtgtctaccagacccccagcagcaacatagga
atgggacgcttcgacagcactggccaaatggacgacaccatccactcagccttctactcc
ccgaacctgtcaatgactagatcagacctcagcaagaggcatccttcatctcctgtgaca
actgatctggagtcatcccccatgcatatggtttcctccccctctgctccaagcccagat
ccactgcctcctcccctgcctctgcccttaaacctcactgtctctggcaatggacaggac
gtggaggagtttgttccggaagttgagctcaaagtctccttgatgaagtcagaaaaaggc
agcttgggcttcaccctcaccaaaggtaatgatcatgggtgttacatccatgacatcgtc
caggacccagccaaaggcgatggaaggctcaggcctggggacagaatgataatggtgaac
gacacagatgtgagcaatatgggccacactgaagtggtcgatcttgtgcgtgctgcccct
cgggtagttgatttggtggtggggagggtactggaggctcccaagccccccattgaagcc
cacttgctacctgacatttgtttcaaaggcaaccaagaaccacttggtttgctactggac
ggtggtagtgacagcgtgtacagagtcttgtttgtgaaagacatcctgccaggttcgctg
gccttcgaggaaggcagcctgagaccactcgatctaatccactacgtcaatggcgcaccc
acccaggacctgactctcagtgagagcacgagactgttggagctctccctggacaacctc
acgctcaaggccacaagggatggaaagcctgtttttcctgggcagaaaagtgtctccttt
ctcaacaacaacattggccccaaggttttatccagcatgaatgggtttcttaagggggaa
gatccaagagatacagagtgccttgcagcactttgtcctttagaggaggagatcataaag
ctggatctggagaagccgcagtctggaggtctgggtttctctgtgatcggaggggaaagg
gggatctttgtcaaatccatcacaccgggaggagtagcagagtccttgggccagctgcaa
gtgggagacaggctgctgaaagtgaatgacgaattaatgacaggcgtgtcccacaccaaa
gctgtcaccaccatccgtaaagctaaaggcctggtacatctcatagtgtccagaccgcca
gaccagaacccaaacacatacctcgcctatctacccatcaactctgacaagtgcaatgga
aacacagatctgagtgaggacagtggggtgaaaactaagctgagtactccccatgatgag
ctgaaatctggcagctttcctcccataccaccaatagactatgacgatggtccactagag
cagaaaagagaaaccgagcacagcgcagaattttctgaggacacagactgtgatggctcc
tctctacctgacgactctcctgagagctcccgtaaagtggaatggcaagaggagagtgtt
gacgatccgaggaatgaaaactatctgcaaatgggtgctggacagccagatgaagatgaa
atcacatggggaagtgatgaattgcccattgaaaacatgaactccaaatcaagagatgat
ggcccaatcatcacagaggatgagctgacctctttgcccctcgtgaaagtggtccccgat
ggccagtacacgggcccaaagctcaacactgtggtccgcatgatgagggggctcctggag
cagaaagtcccactgcaggagtttgaaaatcttcaaaatctccagccgctggacgactgt
ttaataggtcagacaaaggagaacaagaagaagaatcgctacaagaacattgttcccttt
gacacaacacgagttatgctgggcaaagacgggggctacatcaacgccaacttcatcaat
atgccggtgaaggatgagaacttcatgtacattgcctgccaggggcccttacccaccact
ctgggcgacttttggcaaatggtttgggagcagaagtctaacgtgatcgccatgatgacc
caggaggtcgagggcggcaaagtgaagtgtcagcggtactggccggacacgccaaggaca
gcagagatggtggacgacaggttacagattacgctgatcaaagaccagtatctggacaac
tttgtcatccggctcattgaggtcaaaaatgtccagaccaatgaaatccagcgtgtaact
cacttgaactacacgggatggcccgaccacggaacgcccacacaacccgagcagctgctc
acgtttatttcctacatgaggcacgttcatcgatcagggccgataatcacacactgcagt
gcaggcatcggccgttcgggaaccctcatctgtatagacgtggtcctgggtcttatcagt
aaagatgctgattttgatatttcagatgtcgtaaggaacatgagacttcagagacaggga
atggtccagacagaggaccaatatattttctgctatcaagtgatcctctacgtcctcaga
tgccttcaagcagaggaaaacatctcaggatag

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