Lates calcarifer (barramundi perch): 108874405
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Entry
108874405 CDS
T04895
Name
(RefSeq) nuclear factor 7, ovary-like
KO
K12012
tripartite motif-containing protein 35
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108874405
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108874405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-Nse
zf-RING_10
RING_XB3-XBAT31
zf-ANAPC11
zf-rbx1
DUF2067
DUF1244
Perilipin
Exonuc_VII_L
DUF4200
DUF4618
Motif
Other DBs
NCBI-GeneID:
108874405
NCBI-ProteinID:
XP_018518359
UniProt:
A0AAJ7PD23
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Position
LG12:complement(3656675..3660101)
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AA seq
462 aa
AA seq
DB search
MSSRSEEDLSCPVCHDIFKDPVLLSCSHSFCRDCLQSWWREKQTQDCAVCKEKALQSDPP
RNLALKNLCETFLQERDQRASAGSESLCSLHSEKLKLFCLDHQQPVCVVCLHSKSHADHR
FRPIDEAAQDHKEELQKSLKPLQEKLKLLEQVKGNCDQTAEHIKVQVQHTERQIKEQFKK
LHQFLQEEEEARITALREEEELKSQMMKEKIEALSREIAALSHTIRATEEELRAEDVSFL
LNYKAAVKRVQQRPLLEDPQLVSGALIDVAKHLGNLTFNIWNKMEEMVSYTPVILDPNSA
HPDLVLSEDLTSVRCGEKQKLPDNPERIVNFTSVLGSEGFDSGTHSWDVDVGDSTGWSVG
VAAESVQRKGNIQSGIWSIGLANGECRAFSQSAEPVVLSVTEELQQIRVELDWKRGELSF
TSLDTDAHIHTFTHTFTERLFPYISNGDEFPIKILPEVDEDG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgatcagaggaggatctctcctgtcccgtctgccatgacatctttaaggat
cctgttcttctgtcatgtagccacagcttctgtagagactgtctgcagagctggtggaga
gagaaacaaacacaggattgtgcagtttgtaaagaaaaagctttacagagtgatccacct
cgtaacttggctttaaagaacctgtgtgagaccttcttacaggagagagatcagagagct
tcagcagggtctgagtctctctgcagtctgcactctgagaaactgaagctcttctgtctg
gaccatcagcagccagtgtgtgttgtctgtctgcattcaaaatcacacgctgaccacaga
ttcagacccatcgatgaagcagcacaggatcacaaagaggagcttcagaaatccctgaag
cctttacaagagaaactgaagctgcttgaacaagttaaaggaaactgtgatcaaacagca
gaacacattaaggtccaggtccaacacacagagaggcagattaaggagcagtttaagaag
cttcaccagtttctacaagaggaagaggaggccaggatcactgctctgagggaggaagag
gagctgaagagtcagatgatgaaggagaagattgaggctctgagcagagagatagcagct
ctttcacacacaatcagagccacagaggaggagctgagagctgaagacgtctcattcctg
ctcaactacaaggctgcagtgaaaagagtccagcagcgccccctgctggaggatccacag
ctggtctcaggagctctgatagatgtggccaaacacctgggcaacctgaccttcaacatc
tggaacaagatggaggagatggtctcctacactcctgtgattctggatccaaactctgct
catccagacctcgtcttgtctgaagatctgaccagtgtgagatgtggagagaaacagaag
cttcctgacaatccagagaggattgttaatttcacctctgtcctgggctctgaaggcttt
gactcagggactcacagctgggatgttgatgttggagacagtacaggctggtctgtgggt
gtggctgcagagtctgtccagaggaaaggaaacatacagtctggaatatggagtatagga
ttggctaatggtgaatgtagagctttctcccagtcagccgaaccagtggttctctcagtg
acggaggagcttcagcagatcagagttgagttggactggaaaagaggagaactgtcattc
accagtcttgatactgatgcacacatacacaccttcacacacactttcactgagagactg
tttccatatattagcaatggagatgaatttccaattaagattttaccagaggtggatgag
gatggatga
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