Lates calcarifer (barramundi perch): 108874428 Help Entry 108874428         CDS       T04895                                  Symbol col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf04382   Cornified envelope formation lcf04510   Focal adhesion lcf04512   ECM-receptor interaction lcf04518   Integrin signaling lcf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lcf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108874428 (col4a4)    04518 Integrin signaling     108874428 (col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108874428 (col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     108874428 (col4a4)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     108874428 (col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lcf04147]     108874428 (col4a4)    00536 Glycosaminoglycan binding proteins [BR:lcf00536]     108874428 (col4a4) Exosome [BR:lcf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    108874428 (col4a4) Glycosaminoglycan binding proteins [BR:lcf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108874428 (col4a4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  108874428 NCBI-ProteinID:  XP_050921465 UniProt:  A0AAJ8AVS4 LinkDB All DBs Position LG21:complement(808257..836001) Genome browser AA seq 1683 aa AA seqDB search MLLTSWSVSFSYTWLRCLLMILTAPPAVLGGDQTEPCAGRDCSTCQCFPAKGARGSPGAL GQQGLQGPPGFPGAQGPPGEKGMRGDEGLTGAAGLKGDMGNVGAPGFPGLEGVPGHPGPA GGPGFPGLDGCNGTRGQRGDPGYSGEQGIDGAPGLPGPKGFPGDPSVYFIQYPGIPGDVG PSGLPGLQGEQGLPGPMGGLGPSGLDGTNGLPGLPGFRGPPGEKGRSLPGQKGDEGDQGL QGPPGPFEYVDPPEDLYIKGEKGPRGIKGVCGAKGLPGLRSLPGIKGEKGILGFPGPRGF TGRPSFPGEKGIKGIQGNPGLPGLIGREGPKGMMGDPGLKGFPVVSDITNKGAIGDSGAP GLAGPPGNVGLRGMDGPPGPPGRAIPGPEGAVGERGVPGSKGERGDPGQVYIVEITPGEP GKPGRPGLKGQKGEPGSPGRYCLPGIPGQHGEPGQQGHPGAQGLQGFKGNRGNCDCGPPV VLRGPPGPMGDSGNPGFPGAPGSPGERGQNGNPGNPGERGKPGLTGYPGVKGVKGQKGVV IEVEIGGEKGSRGPPGPPGREGLSGRRGLDGVPGATGDPGPEGESLDSFPGDRGLPGFSG QKGSSGPPGATGVGIVGAIGNRGPPGDPGRQGYPGFPGLQGPKGDTLPCAPKNPGPPGEK GDPGNPGNPGLQGSAGFRGITGPDGVKGDKGGSGFPGIPGRQGPMGIVGDIGDEGPDGDS YAGDPGSPGIPGFPGLRGPTGDPDGGPSGPIGFPGPLGAQGPKGVPGPPGKDGLPGVLGL SGGPGPKGQRGQDGAPGVTGPQGPSPKVCDAGKPGSRGPIGPRGPIGQPGFQGEKGDMGE LGAQGIGSKGPVGKPGTPGSPGYPGIQGPSGLIGNSGLPGPNGQKGPLGSPGRCGGPGVP GKTGAPGGPGRTGERGFVGRDGAHGCEGQKGEKGCQGPPGPPGETRFVLIKGDRGKPGPF GISGFPGPRGNKGFPGATGRPGYQGIRGPPGFVGPPGPPGPCGKPGPQGPPGRRGPPGVI GFPGETGDPGDPGCRGKYGEPGLPGCPGEKGDKGDSISCPGLPGNKGPPGDFGPSGTPGP PGYPGRPGPIGAPGQKGCKGDPGHCGDPGPAGVIGPEGPRGHPGLPGNPGKAGADGPPGQ QGCPGLQGPPGPLGLHGLDGLKGVKGDMGTRDQFQSQRLQDIINVGVGPVLQVIPGLPGD KGPQGPQGPSGTSQPGPPGPKGPPGPKGPPGVCGPAGKPGPDCKDPFPGPPGDCGYPGSD GEPGCPGAMGDPGPNPPVPGDEGDNGAPGYCGPPGEKGSPGPTGPPGCPGDAGVKGIKGS QGLMGVPGGRGPRGHPGVKGPPGPKGFSGPMGPKGERGEVSPCPTYPPAQQGPPGPPGPC GDPGEKGLSGEIGLRGLQGMKGDPGSEGPIGPVGPPGQDGDRGEPGLQGESGVVGAKGEP GPIGDRGFPGPTKHLNSGFLLVRHSQSKNIPTCPLNMRALWHGYSLLYLEGQEKAHTQDL GQAGSCMRVFSTMPFSSCNMGACAYASRNDKSYWLSTTVAVPSLPVDGPSIEDHISRCVV CEAPSSPVALHSQTANQPLCPPNWTSLWTGYSFLMHTGAGDEGGGQSLTSSGSCLTDFRA QPFVECQGPRGTCHYFSNIYSFWLTRVETSPYNDPSTTLTEGWQQRGNIGRCNVCMREHE GVR NT seq 5052 nt NT seq  +upstreamnt  +downstreamnt atgctgctgacttcctggtccgtctccttcagctacacctggctcaggtgcctcctgatg atcctgacggctcctcctgcagttctcgggggcgaccagacggagccgtgcgccgggcgg gactgctccacctgtcagtgtttcccagccaaaggagcaaggggttctccaggtgctctg ggacagcagggtcttcaggggcccccggggttcccgggtgctcaagggcctccaggagaa aagggcatgagaggagatgaggggctgacaggagctgcaggactgaaaggagacatggga aatgtcggtgctcctggttttcctggtttagagggagtcccgggtcatccgggtcctgct ggaggtcctggttttccaggtctggatggttgtaatgggaccagagggcagagaggagat cctggatattctggagaacagggaattgatggtgcaccgggtcttccaggaccaaaggga tttccaggagatccatcagtctacttcatacagtaccctggaatacctggagacgtcgga cccagtggacttcctggactacagggggagcagggtctacctggaccaatgggaggactg ggtccatcaggattggatgggaccaatggtctccctggtctgcctggtttcagaggtcca cctggagaaaaaggtcgatctctgcctggacagaaaggagacgagggggatcagggcctc caggggcctccagggccatttgagtacgtcgaccctccagaagacctgtacatcaaagga gagaagggtcctcgggggattaaaggagtctgtggagctaagggactgccgggtctgcgc tctctaccaggaatcaagggagagaaagggattctgggatttcctggacccaggggattt actggcagacctagttttcccggagagaaaggaatcaaggggattcaaggaaatccaggt ctcccaggtctgattggacgagaaggtcctaagggtatgatgggagatccaggtcttaaa ggcttccctgtggtgtcagacatcacaaacaaaggtgccatcggggattctggggccccc ggactggctggcccaccaggaaacgtggggctgagaggaatggatggtcccccaggaccc cccggtagagccatacctggaccagaaggtgctgtgggtgagagaggagttccaggatcc aagggggaaagaggagatcctggtcaggtttatatagtggaaattacacctggagaacct ggaaaaccaggacgacccggacttaaaggacagaaaggagaaccaggaagtccaggtcgt tactgtcttcctgggatcccaggacaacatggagagccaggtcaacagggacacccaggg gctcagggcctccaagggtttaaaggcaatcgtgggaactgtgattgtggccctcctgta gtattgaggggccccccaggacctatgggagattcagggaatccagggtttccaggagcc ccaggaagcccaggggagagaggacagaatggaaacccaggaaaccctggagagagaggg aaaccgggtctgactggatatccaggtgtgaagggggtcaaaggtcagaagggagttgtc attgaggtggagattggaggtgagaagggaagcaggggcccacctggccctccaggcaga gaaggactctcagggagaagaggacttgatggggtccccggggccaccggagaccctggt cctgagggtgaaagtttagacagctttcctggagatagaggcctcccaggattttcaggg caaaaggggtcatcaggacctccaggtgccaccggagtgggtatagtcggtgcaatagga aatcgtgggccccctggggacccaggtcgtcaaggatacccaggttttccagggctacag gggcctaaaggtgacactctgccctgtgcacccaaaaaccctggcccccctggggagaag ggagaccctggaaacccaggaaacccaggactccagggttctgcaggttttcgtggcatc actggacctgatggagttaaaggagacaaaggagggtctggattccctggaatacctgga agacaaggacctatgggtattgttggagatattggagacgaaggacctgatggcgacagt tacgctggagatccaggttctccggggatcccaggctttcctggactcaggggcccaaca ggggaccctgatggtgggccttcaggacccattggattcccgggaccacttggtgctcag ggacctaagggagtccctggtcctcccgggaaagatggactaccgggagtcttgggtttg tccggtggccctggaccaaagggccagagaggacaggatggagcaccaggtgtaactggt ccccaaggcccctcacctaaagtctgcgatgcaggaaaacccggttccaggggccctatt ggccctcggggacccattggacaaccaggctttcagggagagaaaggtgacatgggggag ctgggtgctcaaggtattggctctaaaggccctgtaggtaaaccaggcactccaggttcc ccagggtacccagggatccaaggcccctccggcctcattggaaactcaggactgccaggg cccaatggtcagaaaggtccgttggggtccccaggcaggtgcggagggccaggggttccc gggaagaccggggcccctggaggtccggggagaacaggggagagagggtttgttggacgt gacggagctcatggatgtgaagggcaaaaaggagaaaaaggctgtcaagggcccccaggg cctccaggagaaaccaggtttgtcctcatcaaaggagacagaggaaaaccaggacccttt ggcatcagcggcttccctggaccacgaggaaataaaggttttccaggagctacaggtagg ccagggtatcaaggcatcaggggacccccaggcttcgtaggaccaccaggacctcctgga ccctgcggtaagccaggtccccaaggaccacctggacgtcgaggacctccaggagtcatc ggcttccctggagagaccggagatccaggtgatccgggatgtcgaggaaaatatggagaa cctggtcttccaggatgtcccggagagaaaggtgataaaggagactctattagttgtccc ggtctacctggaaacaaggggcctcctggagactttgggccctcaggaactcctggacca ccaggatatcctggaagacctggtccaatcggggctccgggacagaaaggatgcaaagga gatccagggcactgcggagaccctggtccagcaggggtgatcggtccagaaggtcctaga ggtcatccaggtttaccagggaatcctggaaaggcgggtgctgatggtcctccaggacag cagggctgcccgggactccaaggtcctcctggaccactgggacttcatggactggatgga cttaaaggagtgaagggggacatgggcaccagagaccagtttcagagtcagagattacag gacattataaacgtcggggtgggcccggtcctccaggtcattccaggtcttccaggggat aagggtcctcaaggtcctcaaggtccctctggtacatcccagcctggtccaccgggaccc aaaggccctccaggaccaaaaggacctccaggtgtttgtggacctgcaggtaaacctgga ccagactgtaaagatccattcccaggccctcctggagattgtggttatcctggatcagat ggagagccaggttgtccgggggccatgggagacccaggtccaaaccctccagtacctgga gatgaaggggacaacggggcccctggatactgtgggccaccgggcgaaaagggttctcca gggcccactggtccgccaggctgccccggggatgctggagtgaaaggaataaaggggtca caaggcctgatgggagtacctggtggtcggggtcctagaggtcatcctggtgtcaaagga cctccaggaccaaaaggatttagtggaccgatgggtccaaagggagagaggggagaagtc tctccctgccccacttaccctcctgcccaacagggccccccaggtccccctggcccctgt ggagaccctggagagaaaggacttagcggagaaattggcctgaggggccttcaaggcatg aagggggatcctggatctgagggaccaataggccctgtgggacccccaggtcaagatgga gacagaggagagccaggcctgcagggggagagtggagtagtgggagccaaaggtgaacct ggtccaataggtgacagaggttttcctggaccaaccaaacacttgaactcgggcttcctg ttggtgaggcacagccaatcaaagaatatccccacctgtccattaaacatgagggcccta tggcacggatacagtctgctgtacctggagggtcaggagaaggctcacactcaggacctg ggtcaggcggggtcatgcatgcgtgtcttctccaccatgccgttctcttcctgtaacatg ggcgcctgcgcttatgccagccgtaacgataaatcctactggctgtcgacaacggtggcc gtccccagcttacctgtggacggaccctccattgaagaccacatcagccgctgtgtggtc tgcgaagctccctcctcacctgtcgcactgcacagccagaccgccaaccagccactctgc ccccccaattggacaagcctgtggaccggatactccttcctcatgcatacaggtgcaggt gatgagggcggtggccagtctctgacatcatcaggtagctgtctgacagacttcagggcc cagcccttcgtggagtgtcaggggcctcgaggaacctgccactacttctccaacatctac agtttctggctgaccagagtggaaacaagcccctacaacgatccctccaccacactgacc gagggctggcagcagagggggaacatcgggaggtgcaacgtctgcatgagggagcacgag ggagttcgatag

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