Lates calcarifer (barramundi perch): 108874459
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Entry
108874459 CDS
T04895
Name
(RefSeq) rab9 effector protein with kelch motifs
KO
K20285
Rab9 effector protein with kelch motifs
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108874459
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108874459
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_6
Kelch_1
Kelch_2
NANM
DUF6242
DUF7538
FapA
APH
PCSK9_C2
Motif
Other DBs
NCBI-GeneID:
108874459
NCBI-ProteinID:
XP_018518449
UniProt:
A0AAJ7PDJ5
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Position
LG9:complement(11952084..11955447)
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AA seq
346 aa
AA seq
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MEFLPVLDPLDKPKEGIWYSLIPRGSAPGVSVGHTCTFTPSEEGGKGRILIVGGANPSGS
FSHSHIIDLDNHEWDIPEWEGLEARYEHCSFVPESCPQSLWVFGGAQQSGNRSCIQNIQL
TGSGSHWKDVSVNGKPPCPRTYHTNSACLGNRLYVFSGGEAGAAPVSDQKLHVFDTVSST
WSQPETQGRHPPARHGHIIVAVGAKIYIHGGMAGDKFHSDMYSLDTGSMKWEVVKAKGDI
PPGVAAHSAVALGKNIYIFGGMTADGASNSMYRFNTDKSRWVLMKFEGDMPPNRLDHSMC
LLPWKVHDEGNASSPAASETIHLAFVFGGMDTQGVIHNDCIVTVVT
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctcccagtacttgaccctttagataaacccaaagagggaatatggtattct
ctgatacccagaggaagtgctccaggtgttagtgtgggtcacacttgcacatttactccg
tctgaagaaggagggaaaggaagaatccttattgttgggggagccaaccccagtggcagt
ttctcacattcccatatcatagatctagataatcatgaatgggacattccagagtgggag
ggcttggaggcacgatatgaacactgcagctttgtgccagagagctgcccacagagcctg
tgggtgtttgggggggcacagcagagcggcaatcgcagttgtatccagaatatacagtta
acaggcagtgggtcccactggaaagatgtatcggtaaatgggaagcccccttgtcccagg
acataccacaccaactcagcctgccttgggaacagattgtatgtcttctctggtggtgaa
gcaggagctgcacctgtgtcagaccaaaaacttcatgtcttcgatacagtgtcttccacc
tggtcccaaccagaaacacaaggcagacacccaccagccagacacggccacataatcgta
gcagtgggtgcaaagatctacattcatgggggcatggctggagacaaattccacagtgac
atgtactctctcgacacagggagcatgaagtgggaggtagtgaaggccaaaggagacatc
ccaccaggagtagcagctcactcagctgtggcactgggaaagaacatctacatcttcgga
gggatgacagcagatggagccagcaactccatgtacagattcaacactgacaaaagtaga
tgggtcctaatgaaatttgaaggagatatgccacccaaccgcctagaccactccatgtgt
ttactgccatggaaggtgcatgatgaggggaatgccagcagcccagcagcctcagagaca
atacatctggcctttgtatttggagggatggacactcagggtgtcatacataatgactgt
attgttacagtggtgacatga
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