Lates calcarifer (barramundi perch): 108874481
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Entry
108874481 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108874481
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108874481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
DFF-C
DUF4329
Motif
Other DBs
NCBI-GeneID:
108874481
NCBI-ProteinID:
XP_018518484
UniProt:
A0AAJ7LCI0
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MSDEDREEGVPPSKTTLCGEHESQTKAQSPEQQIPHSAGPGPEPGPGPGPSCVSMKRDRS
ASPSLLSDFKQSVDGRIQQQRPDSPGPSCLSLKSNESKDPFIDFKGRRPSADQIVDQESS
EVPSGQSAQQHQTHLDSIFMLLEENIVTFVKKELKKMQKVLSPDYPECLESQREDEEVLD
GEDEEQRRSSREEFLKITLNFLRRMKQEELADCLQSRSPIGVCQPKLKSNLRRKFQCLFE
GISKPGNPTLLNQIYTELYITEGGTGEVSDEHEVRQMETTSRKPDRPETTIRQEDLFKAS
PGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKLS
LVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLL
TNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEDQAS
RIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTQMYIYFLVVQTKLK
SIKYDGGSGTDPLWSPETRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSG
VFTQIFIEERGLYQDKVFCFVHLSVQEFLAAFHVHLTFIKSGVNLLSEEQPTSQKSKTRK
DDSAETQFYQRAVDKALQSPNGHLDLFLRFLLGLSLQTNQILLRGLLTQTGSGSETNQET
VQYIKKKVEETPSAEKSINLFHCLNELNDRSLVEKIQQSLSSGSLSTDKLSPAQWSALGF
ILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQS
SSLTDLDLSNNDLKDSGLKTLSVGLKSPHCSLETLSLSGCLITEEGCASLVSALRSNPSH
LRELDLSYNHPGDSGVKLLSAGLEDPDWRLDTLRVEPGGVRWLRPGLRKYSCQLTIDTNT
VNTKIKLSDNNRKVTLVDEDQSYPDHPDRFDQCPQLLCTTGLTGRCYWEVEWRGRVYISV
SYRGIRRKGDSDCVFGRNDQSWTLYCSGGGYYFWHSSRGTSMSSSSSSSSSSSSSSSSSS
SSSSSSSSSVSNRVAVYVDCPAGSLSFYRVSSDSLIHLHTFNTTFTEPLYPGFGFGFWPR
FSSVSSLSLCSV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaggacagagaggagggagtccctccctctaaaaccactctgtgtggggaa
catgagagccagaccaaagctcagagcccagagcagcagataccacactccgctggacct
ggacctgaacctggacctggacctggacccagctgtgtgtccatgaagagagaccgatca
gcatctccttctcttctttcagatttcaaacaatctgttgatggaaggatccagcagcag
agaccagactctcctggacccagctgtctgtctttaaagagcaacgagtcgaaggacccg
ttcattgactttaaaggtcgacgtccatcagctgatcagatagtggaccaggagagctca
gaggttcccagtggtcagtctgcccagcagcatcaaacacacctggactccatatttatg
ctgctggaggagaacatcgtcacttttgtgaagaaggagctgaagaagatgcagaaggtt
ctgagtccagattacccagaatgcttagagagtcagagggaggatgaggaggtgttggac
ggtgaggatgaagagcagaggaggagcagcagagaggagtttctgaagatcacactgaac
ttcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcagatctcctatt
ggagtttgtcaacctaaacttaaatctaacctgaggaggaagttccagtgtttgtttgag
gggatctctaaaccaggaaacccaacccttctgaatcagatctacacagagctctacatc
acagagggagggactggagaggtcagtgatgaacatgaggtcagacagatggaaacaaca
tccaggaaaccagacagaccagaaacaaccatcagacaagaagacctctttaaagcctca
cctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaa
acagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacata
cacttcacatttccattcactttcagagagctgaatgtgctgaaagagaaaaagttgagc
ttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggttt
gaagagttccaggttgtgttcatctttgacggcctggatgagtgtcgacttcctctggac
ttccacaacactgagatcctgactgatgttacagagtccacctcagtggacgtgctgctg
acaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttc
actgacccacagaaggaggagtacttcaggaagaggttcagagatgaggatcaggccagc
aggatcatctcccacatcaagacctcacgaagcctccacatcatgtgccacatcccagtc
ttctgctggatcactgctacagttctggaggatgtgttgaaaaccagagagggaggagag
ctgcccaagaccctgactcagatgtacatctacttcctggtggtccagaccaaattgaag
agcatcaagtatgatggaggatctgggacagatccactctggagtccagagaccaggaag
atgattgagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttc
tatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcagga
gtgttcacacagatctttatagaggagagaggactgtaccaggacaaggtgttctgcttc
gtccatctgagtgttcaggagtttctggctgcttttcatgtccatctgaccttcatcaag
tctggagtcaatctgctgtcagaagaacaaccaacctcccagaagtctaaaacaagaaaa
gatgactctgcagagacacagttctaccagagagctgtggacaaggccttacagagtcca
aatggacacctggacctgttcctccgcttcctcctgggtctttcactgcagaccaatcag
attctcctacgaggtctgctgactcagacaggaagtggttcagagaccaatcaggaaaca
gtccagtacatcaagaagaaggttgaagagactccctctgcagagaaaagcatcaacctg
ttccactgtctgaatgaactgaatgatcgttctctagtggagaagatccaacagtccctg
agttcaggaagtctctccacagacaaactgtctcctgctcaatggtcagctctgggcttc
atcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgcttca
gaggaggctcttctgaggctgctgccagtggtcaaagcctctaacaaagctctactgagt
ggctgtaacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcc
tctagtctgacagatctggacctgagtaacaacgacctgaaggattcaggactgaagact
ctgtctgttggactgaagagtccacactgttcactggagactctcagtctgtcaggctgt
ctgatcacagaggaaggctgtgcttctctggtctcagctctgagatccaacccctcccat
ctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtct
gctggactggaggatccagactggagactggacactctcagggtggagcctggtggagtc
cgatggttgagaccaggtctgaggaagtattcctgtcaactcacaatcgacacaaacaca
gtgaacacaaagatcaaactgtctgacaacaacaggaaggtgacacttgtggatgaggat
cagtcatatcctgatcatccagacagatttgatcagtgtcctcagctgctgtgtacaact
ggtctgactggtcgctgttactgggaggtcgagtggagaggaagggtttatatatcagtg
agttacagaggaatcagaaggaaaggagacagtgactgtgtgtttgggaggaacgatcag
tcctggaccctgtactgctctggtggtggttactacttctggcacagtagcagaggaaca
tccatgtcctcctcctcctcctcctcctcctcctcttcctcttcctcctcctcctcttcc
tcctcctcctcctcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgt
cctgctggctctctgtccttctacagagtctcctctgactctctgatccacctccacacc
ttcaacaccacattcactgaacctctgtatcctgggtttgggtttggtttttggcctagg
ttctcttctgtttcctcattgtctctgtgttcagtgtag
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