Lates calcarifer (barramundi perch): 108874587 Help Entry 108874587         CDS       T04895                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf03013   Nucleocytoplasmic transport lcf03040   Spliceosome Brite KEGG Orthology (KO) [BR:lcf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108874587   09122 Translation    03013 Nucleocytoplasmic transport     108874587  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lcf03019]     108874587    03041 Spliceosome [BR:lcf03041]     108874587 Messenger RNA biogenesis [BR:lcf03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      108874587 Spliceosome [BR:lcf03041]  Complex C   Other components    EJC/TREX     108874587  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     108874587 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_Vps41 eIF2A DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N WD40_RFWD3 RMC1_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Tricorn_2nd B-prop_COPA_B_2nd Beta-prop_ACSF4 TRM82_WD PD40 PAC11 Beta-prop_SPT8 Beta-prop_WDR75_1st ASA1 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_NWD2_C Peptidase_S9_N Beta-prop_Nup120_160 WD_LRWD1 Cytochrom_D1 Beta-prop_WDR11_1st TP_0598_N DPPIV_N MIOS_WD40 Beta-prop_ELP1_1st PROPPIN Beta-prop_SCAP YNCE Beta-prop_DCAF4 Motif Other DBs NCBI-GeneID:  108874587 NCBI-ProteinID:  XP_018518614 UniProt:  A0AAJ7LD47 LinkDB All DBs Position LG8:25702369..25705998 Genome browser AA seq 322 aa AA seqDB search MASQYYQDMQESFKNNSKSREFPAHTAKVHSVAWSCDGRRLASGSFDKTASVFILEKDRL VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW SPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVEELVCVRCFSRLDWPV RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAFACDDK EGKYDNNREAGTVKLFGLPNDS NT seq 969 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgcagtactaccaagacatgcaggagagcttcaaaaataacagcaagagccga gagttcccggctcacaccgctaaagtccactcggtggcctggagctgcgacggcaggaga ctcgcctccggatcttttgacaaaaccgccagcgttttcatcctggagaaagaccggctg gtgaaagaaaacaactacagaggtcatggagacagcgtggatcagctctgctggcaccca accaacccagacctgtttgtcacagcatctggagacaagaccattcgcatatgggacgtc cgcaccaccaagtgcatcgccaccgtcaatacaaaaggagaaaacatcaacatctgctgg agtcctgatggtcagaccatcgctgtcggcaacaaagacgacgttgtgaccttcatcgac gccaagactcatcgctccaaggccgaggaacagttcaagttcgaggtgaatgagatctcc tggaacaacgacaacgacatgttcttcctcacaaacggcaacggctgcatcaacattctg agttatccagagctgaagcccattcagtccatcaacgctcacccgtccaactgcatctgc atcaagttcgaccccacgggaaaatactttgccacaggaagtgccgacgccctcgtcagc ctgtgggacgtggaggagctggtgtgtgttcgctgcttctccaggttagactggccggtg aggactctgagtttcagccacgatgggaagatgttggcctcagcctcagaggatcatttc atcgacatcgctgaggtggagacaggagagaagctgtgggaggtgcagtgtgactctcca accttcactgtcgcctggcacccgaagaggccgctgctcgccttcgcctgcgacgacaag gagggcaagtacgacaacaaccgggaggcgggcaccgtcaaactgttcggcctccccaac gactcctga

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