Lates calcarifer (barramundi perch): 108874600
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Entry
108874600 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108874600
KO
K22146
gasdermin-E
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108874600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108874600
Transporters [BR:
lcf02000
]
Other transporters
Pores ion channels [TC:
1
]
108874600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Lamprin
Motif
Other DBs
NCBI-GeneID:
108874600
NCBI-ProteinID:
XP_018518620
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MFAAEAKAVVKNLGAHGDLISNENLDQKMDLLTLVRVREGRFWSVPKYRTMNYTLPELME
ETEEFCPDFTEELLVQDFVSNVETSGSGRAGGGDGDMGEANVSANTDTVDGAAAPVSMMT
KKANVKTVRSKFSGRKIKKDSVDELGLKDTDKLTFVYQTVYNTGPVRLIRKAKVDGSISA
SCKKMLNLLVKGSRKEETSFTVPEKSTFAFSLMEIKLQEETLKISCEPWTHKHSALDLLN
SDDVNTDSTLTLQQVKEGLQMKEAALQPLSDLPPSTAADVLKSLRKLLEDGDALSLLETT
LDQYSRGVSVRPQSQSVSSFMDLLDESGSSSGLKDALHLFISAMDTLPDGVPVLLTSCSP
ETLRVLNQLVDGLKEGGLKEGGLKEGGLKEGGLKEGGLKEGGLTRLPQSLPPSLQEEGEL
RWAAELLCSTSQTLRELSEQWERPELPPGVLLEVLCLVLRGLSILQPGAESQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagctgaagccaaagctgtggttaagaacctgggagctcatggagacctgatc
tctaatgaaaacttagaccagaagatggatctgctgactctggtccgagtcagagaggga
aggttctggtccgtccccaaatacaggaccatgaactacacactgcctgagctgatggag
gagacggaggagttctgtccagacttcactgaggagctgctggttcaggacttcgtctct
aacgtggagaccagcggcagcggcagagcaggtggaggagacggagacatgggtgaagct
aacgtctctgctaacacagacactgtggatggagccgctgctcctgttagcatgatgaca
aagaaagctaacgttaagacagtgaggagtaaattcagcggcaggaagataaagaaggac
agtgtggacgagctgggcctgaaggacacagacaaactgacctttgtttatcagaccgtc
tacaacaccggccctgtcagactcatcaggaaggccaaggtggacggatccatctccgcc
tcctgtaagaagatgctgaacctgctggtgaagggcagcaggaaggaggagacaagcttc
actgttccagagaaatcgaccttcgctttcagtctgatggagatcaagctacaggaggag
acgctgaaaatctcctgtgagccgtggactcacaaacactctgctctggatctgctgaac
agtgacgacgtcaacactgactctactctgactctgcaacaggtgaaagaagggttacag
atgaaggaggcagccctccagcctctgtctgatcttcctccatccacagctgctgatgtg
ttgaagtctctcaggaagctgctggaggacggagacgctctgtctctgctggagaccacg
ttggatcagtacagtagaggagtctctgtccgtcctcagtctcagtccgtctcctccttc
atggatctcctcgatgagtctggatcctcctcaggactgaaagatgctcttcacctgttc
atcagcgccatggacactctcccagatggagtaccggtcctcctgacctcctgtagtcct
gagacactgagagtcctcaaccagctggtggatggactgaaggagggaggcctgaaggag
ggaggtctgaaggagggaggtctgaaggagggaggactgaaggagggaggactgaaggag
ggaggcctgaccagactcccacagtccctccccccctccctgcaggaggagggggagctc
cgctgggcggcagagctcctgtgttcgaccagtcagacgctgagagagctgagcgagcag
tgggagagaccggagctccctcctggagtcctgctggaggtcctgtgtctggtcctccga
ggactcagcatcctgcagcccggagcagagtcacagtaa
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