Lates calcarifer (barramundi perch): 108874645
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Entry
108874645 CDS
T04895
Symbol
zgc:158270
Name
(RefSeq) atlastin-2 isoform X2
KO
K17339
atlastin [EC:3.6.5.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108874645 (zgc:158270)
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108874645 (zgc:158270)
Autophagy
ER-phagy
ER-phagy recepters
108874645 (zgc:158270)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF3040
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
108874645
NCBI-ProteinID:
XP_018518679
UniProt:
A0AAJ7LCZ5
LinkDB
All DBs
Position
LG5:1083305..1098432
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AA seq
575 aa
AA seq
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MAAEESRLKQRNHKNSIFKEGGHKFKSDTSQMRREEDEDDLLEEGEEVEEVGVARPVQIV
TADEEEHSFALQEEALERLLLQEEVQDLHVVVVSVAGAFRKGKSFLLDFMLRYMYKQSDS
WVGGEDEPLTGFTWRGGCERETTGILAWSEVFVVEKPDGCKVAVLLIDTQGAFDSQSTIK
DCATLFALSTMTSSVQVYNLSQNVQEDDLQHLQLFTEYGRLAMEEVYEKPFQTLMFLIRD
WSYPYEHPYGLEGGQSFLEKRLQVKQNQHEELQNVRKHIHSCFSNISCFLLPHPGLKVAT
NPRFDGRLRDIDEEFKKELVNLVPTLLSPENLVEKEIGGVKITCRDLLQYFKAYMKIYQG
EELPHPKSMLQATAEANNLAAVAGAKDVYNKSMEQVCGGDKPYISPTELERRHVELRQAS
VRHFRSVKKMGGEEFCRRYQEQLEAELDEAYANFSKHNDGKNIFYAARTPATLFAVMFVM
YVASLVTGFVGISSVATLCNLVMGVALTALCIWAYVKYSGEFREVGGIIDQVAETLWEQV
FSKLFEVARSRVPLGSLIPAPRPRLASNNNVKKKN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggagagcaggttgaagcagcggaatcacaaaaacagcatctttaaagag
ggtggccacaagtttaagtcggacacgtcccagatgaggcgtgaggaggacgaagacgac
ctgctggaggaaggggaggaggtggaggaggtgggcgtggccaggccggtgcagatcgtg
acggcggatgaggaggagcactcgttcgcgctgcaggaggaggcgctggagaggctgctg
ctgcaggaggaggtgcaggacctccacgtggtcgtcgtctccgtggccggagctttccgc
aagggcaagtccttcctgctggacttcatgctgcgctacatgtacaaacagtcggactca
tgggtcggcggcgaggacgagcctttgacgggcttcacctggcgaggcggctgtgagagg
gagaccacgggcatcctggcctggagcgaggtgttcgtggtggagaaaccagacggctgc
aaggttgcagttctactaatcgacacacagggggcgtttgacagccagtccaccatcaaa
gactgtgccacgctgttcgccctgagcaccatgaccagctctgtccaggtgtacaacctg
tcccagaacgtccaggaagacgacctccagcacctccagctcttcactgagtatggacga
ctggccatggaggaagtctacgagaaaccttttcagactctgatgttcctgatccgagac
tggagttatccttacgaacatccgtacggtctggagggaggacagagcttcctggagaaa
cgtctgcaggtgaagcagaaccaacacgaggagctgcagaacgtcaggaaacacatccac
tcctgcttctccaacatcagctgcttcctgctgcctcaccccggcctcaaggtggccact
aaccctcgcttcgacggccgcctcagagacatcgatgaggagtttaagaaggagctggtg
aacctcgtcccgacgctgctgtctccagagaacctggtggagaaagagatcggaggagtg
aagatcacctgcagagacctgctgcagtacttcaaggcgtacatgaagatctaccaggga
gaggagcttcctcaccccaagtcaatgctgcaggcaacagctgaagccaataaccttgca
gctgtagcaggagccaaagacgtatacaacaaaagcatggagcaggtctgcggcggagac
aaaccctacatttccccgacggagctggaacgccgtcacgtggagctgcggcaggcgtcg
gtgcggcacttccgctccgtcaagaagatgggcggcgaggagttctgccgccgctaccag
gagcagctggaggcggagctcgacgaggcctacgccaacttcagcaagcacaacgacggc
aagaacatcttctacgccgcgcggacgcccgccacgctgttcgccgtcatgttcgtcatg
tacgtggcgtcgctggtcacgggcttcgtgggcatcagctccgtggccacgctgtgtaac
ctggtgatgggcgtggctctgacggcgctctgcatctgggcttacgtcaaatactccgga
gagttccgcgaggtcggaggaatcatcgaccaggtggctgaaaccctctgggaacaggtt
ttctccaaactcttcgaggtggctcggagtcgagtcccgttggggagcctgatcccggcg
ccgcggccccggctcgcctcaaacaacaacgtcaagaagaaaaactag
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