Lates calcarifer (barramundi perch): 108874700
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Entry
108874700 CDS
T04895
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108874700
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108874700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
LRR_8
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108874700
NCBI-ProteinID:
XP_050924948
UniProt:
A0AAJ8B416
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MISVSSPGEGRKSSMNQCEEPGPGPEPEPGSGPSCVSFKSDWSNGRLIDFKGPQPSVRKR
IYGRPCSSEPGPVPGLSLSFKNDWSNERYTDFKGRQPSASKRRKLGEPEPSCLSMKSDWS
INRPIYFKDRRLSFHPRVDQESSEVPSGQSAQQHQTHLDSIFMLLEENIVTFVKKELKKM
QKVLSPDYPECLESQREDEEVLDGEDEEQRRRSREAFLKITLNFLRRMKQEELADCLQSK
TYAAVCQRKLKSNLKKKFQCLFERISKSGNPTLLNQIYTELYITEGGTGEVNDEHEVRQI
ETTSRKPDRPETTIRQEDIFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAN
QDIHFTFPFTFRELNVLKEKKLSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRL
PLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEV
RGFTDPQKEEYFRKRFREKKQASRIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTRE
GGELPKTLTQMYIHFLVVQSKVKNIKYDGGSGTDPHWSPETRKMIESLGKLAFDQLQKGN
LIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSFQEFLAALHVHLT
FINSGVNLLSEEQPTSQKSETRKDDSAETQFYQSAVDKALQSPNGHLDLFLRFLLGLSLQ
TNQTLLRGLLTQTGSGSETNQETVQYIKKKIEEIPSAERSINLFHCLNELNDCTLVEEIQ
QSLSSGSLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKA
LLSGCNLSKRSWEALSSVLSSQSSSLRDLDLSHNDLQESGLKTLSVGLKSPHCSLESLRL
SVCNLSERSCEALSSVLSSQSSSLRHLDLSNNNLQDSGVKTLSVELESPHCLLKTLRMSG
CKLSERSWEALSSVLSSQSSSLRDLDLSNNNLQDSGLKTLSVGLESPHCSLETLSLSGCL
IREKGCASLASALRSNPSHLRELDLSYNHPGDSGVKLLSAGLEDPDWRLDTLRVEPGGVR
WLRPGLTKYSCQLTIDTNTVNTKIKLSDDNRKVIYVEEDQSYPDHPDRFDQLSQLLCRTG
LTGRCYWEVEWRGGVDVSVSYRGISRKGESDECWFGRNNQSWSLRCAYPQGYSVCHNNRE
TTISSSSLCHRVAVYVDCPAGSLSFYRVSSDSLIHLHTFNTTFTEPLYPGFTLWRPGSSV
SLCSV
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgattagtgtttcctctccaggtgaaggtagaaagagcagcatgaatcagtgtgaggaa
cctggacctggacctgaacctgaacctggatctggacccagctgtgtgtccttcaagagt
gactggtcaaatggtcgtctcattgattttaaaggaccacagccctctgttagaaagagg
atctatgggagaccatgctcttctgagcctggacctgtacctggactcagtttgtccttc
aagaatgactggtcaaatgaacgctacacggattttaaaggacgacaaccctctgcttca
aagaggaggaagctgggagaacctgaacccagctgtttgtccatgaagagtgactggtct
ataaatcgtcctatatacttcaaagatcgacgtctcagttttcatccaagagtggaccag
gagagctcagaggttcccagtggtcagtctgcccagcagcatcaaacacacctggactcc
atatttatgctgctggaggagaacatcgtcacttttgtgaagaaggagctgaagaagatg
cagaaggttctgagtccagattacccagaatgcttagagagtcagagggaggatgaggag
gtgttggacggtgaggatgaagagcagaggaggaggagcagagaggcatttctgaagatc
acactgaacttcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcaaa
acttatgctgcagtttgtcagcgtaaacttaaatctaacctgaagaagaagttccagtgt
ttgtttgagaggatctctaaatcaggaaacccaacccttctgaatcagatctacacagag
ctctacatcacagagggagggactggagaggtcaatgatgaacatgaggtcagacagatt
gaaacaacatccaggaaaccagacagaccagaaacaaccatcagacaagaagacatcttt
aaagcctcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggc
attgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaac
caggacatacacttcacatttccattcactttcagagagctgaatgtgctgaaagagaaa
aagttgagcttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatc
tgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgactt
cctctggacttccacaacactgagatcctgactgatgttacagagtccacctcagtggac
gtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataacc
acacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtc
agagggttcactgacccacagaaggaggagtacttcaggaagaggttcagagagaagaag
caggccagcaggatcatctcccacatcaagacctcacgaagcctccacatcatgtgccac
atcccagtcttctgctggatcactgctacagttctggaggatgtgttgaaaaccagagag
ggaggagagctgcccaagaccctgactcagatgtacatccacttcctggtggttcagtcc
aaagtgaagaacatcaagtatgatggaggatctgggacagatccacactggagtccagag
accaggaagatgattgagtctctgggaaaactggcttttgatcagctgcagaaaggaaac
ctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtg
tactcaggagtgttcacacagatctttaaagaggagagaggactgtaccaggacaaggtg
ttctgcttcgtccatctgagttttcaggagtttctggctgctcttcatgtccatctgacc
ttcatcaactctggagtcaatctgctgtcagaagaacaaccaacctcccagaagtctgaa
acaagaaaagatgactctgcagagacacagttctaccagagtgctgtggacaaggcctta
cagagtccaaatggacacctggacctgttccttcgcttcctcctgggtctttcactgcag
accaatcagactctcctacgaggtctgctgactcagacaggaagtggttcagagaccaac
caggaaacagtccagtacatcaagaagaagattgaagagattccctctgcagagagaagc
atcaacctgttccactgtctgaatgaactgaatgattgcactctagtggaggagatccaa
cagtccctgagttcaggaagtctctccacagataaactgtctcctgctcaatggtcagct
ctggtcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaatac
tctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctctaacaaagct
ctactgagtggctgtaacctctcaaagagaagctgggaagctctgtcctcagttctcagc
tcccagtcctctagtctgagagatctggacctgagtcacaacgacctgcaggaatcagga
ctgaagactctgtctgttggactgaagagtccacactgttcactggagtctctcagactg
agtgtctgtaacctctcagagagaagttgtgaagctctgtcctcagtcctcagctcccag
tcctctagtctgagacatctggacctgagtaacaacaacctgcaggattcaggagtgaag
actctgtctgttgaactggagagtccacactgtttactgaaaactctcagaatgagtggc
tgtaagctctcagagagaagctgggaagctctgtcctcagttctcagctcccagtcctct
agtctgagagatctggacctgagtaacaacaacctgcaggattcaggactgaagactctg
tctgttggactggagagtccacactgttcactggagactctcagtctgtcaggctgtctg
attagagagaaaggctgtgcttctctggcctcagctctgagatccaacccctcccatctg
agagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtctgct
ggactggaggatccagactggagactggacactctcagggtggagcctggtggagtccga
tggttgagaccaggtctgacgaagtattcctgtcaactcacaatcgacacaaacacagtg
aacacaaagatcaaactgtctgacgacaacaggaaggtgatatatgtggaggaggatcag
tcatatcctgatcatccagacagatttgaccagttgtctcagctgctgtgtagaactggt
ctgactggtcgctgttactgggaggtcgagtggagaggaggagttgatgtatcagtgagt
tacagaggaatcagcaggaaaggagagagtgatgaatgttggtttggaagaaacaatcag
tcctggagtctgagatgcgcttatcctcagggttactctgtctgtcacaataacagagaa
acaactatctcctcatcctctctctgtcacagagtagcagtgtatgtggactgtcctgct
ggctctctgtccttctacagagtctcctctgactctctgatccacctccacaccttcaac
accacattcactgaacctctgtatcctgggtttactctctggcggcctggttcctcagtg
tctttgtgttcagtgtag
DBGET
integrated database retrieval system
