KEGG   Lates calcarifer (barramundi perch): 108874814
Entry
108874814         CDS       T04895                                 
Symbol
tubb6
Name
(RefSeq) tubulin, beta 6 class V
  KO
K07375  tubulin beta
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagosome
lcf04540  Gap junction
lcf04814  Motor proteins
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108874814 (tubb6)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108874814 (tubb6)
  09142 Cell motility
   04814 Motor proteins
    108874814 (tubb6)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108874814 (tubb6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108874814 (tubb6)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108874814 (tubb6)
   04147 Exosome [BR:lcf04147]
    108874814 (tubb6)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108874814 (tubb6)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108874814 (tubb6)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108874814 (tubb6)
  Exosomal proteins of colorectal cancer cells
   108874814 (tubb6)
  Exosomal proteins of bladder cancer cells
   108874814 (tubb6)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 108874814
NCBI-ProteinID: XP_018518871
UniProt: A0A4W6CUN9
LinkDB
Position
Unknown
AA seq 446 aa
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGNYVGDSALQLDRVNVYYNEASSHKYV
PRAVLVDLEPGTMDSVRSGAFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKVAVCDIAPRG
LKMAATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATANDGEENFEDEEDEINE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagagaaatcgttcacatccaggcgggacagtgtgggaaccagatcgggaccaagttt
tgggaagtcatcagcgacgagcacggcatcgaccctgcgggaaattatgtgggtgactca
gctctccagctggacagagtcaacgtctactacaatgaggcttcctcacataaatacgtc
ccccgggcagtgctggttgacctggaaccaggaaccatggacagtgttcgctcaggagcc
ttcggacaactcttcagaccagacaacttcatctttggtcagacaggtgcggggaacaac
tgggccaaaggccactacacggagggggcggagctcgtggactcggtcctggacgtggtg
aggaaggagtgtgagcactgcgactgtctccagggtttccagctgactcactctttgggt
ggtggcaccggctcaggcatgggcaccctgctgatcagcaagatccgcgaggagtacccg
gaccggatcatgaacaccttcagtgtcatgccctcacctaaggtgtcggacaccgtcgtg
gagccctacaacgccaccctgtcggtccaccagctggtcgaaaacacagatgagacctac
tgcatcgacaacgaggccctgtacgacatctgtttccgcactcttaaactcacgacgccg
acctacggcgacctcaaccacctggtgtctgccaccatgagtggcgtgacgacctcgctc
cgtttccctggacagctcaacgcagatctccgcaagctggcagtcaacatggtgccgttc
cccaggctccacttcttcatgcctgggttcgctcctctgacggcgaggggcagccagcag
taccgagccctcaccgttcctgagctcacccagcagatgttcgatgccaggaacatgatg
gcggcctgcgaccctcgccatggccgctacctgaccgtggccaccgtcttccgtgggccc
atgtccatgaaggaggtggacgagcagatgctgaacgtccagaacaagaacagcagctac
ttcgtggagtggatccccaacaacgtcaaggtggccgtctgcgacatcgctcctcggggc
ctcaagatggccgccaccttcattggtaacagcacagccatccaggagctgttcaagagg
atctccgagcagttctcggccatgttccgccgaaaggccttcctgcactggttcacaggc
gaaggcatggacgagatggagttcacagaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggaggccaccgccaacgacggcgaggagaactttgaggacgag
gaggacgagatcaacgagtaa

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