Lates calcarifer (barramundi perch): 108874816
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Entry
108874816 CDS
T04895
Name
(RefSeq) fibrinogen alpha chain
KO
K03903
fibrinogen alpha chain
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108874816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108874816
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108874816
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108874816
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108874816
Hyaluronan
Extracellular matrix or blood plasma proteins
108874816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
108874816
NCBI-ProteinID:
XP_018518875
UniProt:
A0AAJ7LD03
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MKQLGVLVCLSLISVAAASGTIDPRGARPVEHGTRSEKCATQKEWPFCTDDEWYSKCPSG
CRIQGLMDKYDHNLLKKIEKIRSLLDQNKAKHRSADQVSKQTYDVLKEKLTIDSGADNNY
YDLAQSLRQRITDMKIKIDRQLRILAALKDRVKDQVVEMQRMEIDIDIKLRSCKGSCSSY
AEYNVDHESYVTLEKQITQLDSQPAQSIESVGTLYVMKSRRMQDTNVDSIYKSGATGATV
SAQRRQDMFPDVNTVELILEEEGSSTSPATISKEPGTSYSASKSSSTSSSTSSSSSSTSS
SSSSTSSSSSITELGGRGDGHLLGGGFEVYRQPSTSHVSTQTISCTKSIRRTIVHTKDGP
VEKVEEVMEGGPECQAMTDHTGGGMSSLFPTLTHTSSSSSSSITSKSVHVGGAKGSLTED
SKTTFGHTGFDLGGFLIDNPEDDIPDFHARSVKSVRVERQADYVGKDCVEAHRNHLKGET
NGLFKIKPGGTDSTGVVEVYCQQEGLMGGWLLVQQRESGALSFNRSWADYRNGFGSVDAH
GKGEFWLGNQNLHLLTNQGETMLKVELEDWEGGVASAEYMVRVGSEEEGYPLHVSGYTGD
AGDALVRPKSDMASYLSHNGMKFSTFDRDNDKWEENCAEMYGGGWWYNNCQSANLNGIYY
KGTYDPEKNAPYEIENGVVWVTYKPANYSLKTVKMFIRSTAF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctcggtgtgctcgtctgtctaagtttaatttctgtggctgcagcttctggt
actatcgaccccagaggagctcgtccggtggagcacggcaccagatctgagaaatgtgcc
acacagaaggaatggcctttctgcacagatgatgaatggtactccaaatgcccgtcggga
tgcaggatccagggtctgatggacaaatacgaccacaacctgctgaagaagatcgagaag
atccgcagcctcctggatcagaacaaggccaagcaccgttctgccgaccaggtgtccaaa
cagacctacgacgtcctgaaggagaaactcaccattgactctggtgccgacaacaactac
tacgacttggcccagagtctgcgtcagagaatcactgacatgaaaatcaagatcgacaga
cagctgaggatcctggccgccctgaaggatcgagtcaaagaccaggtcgtcgagatgcag
aggatggagatcgatatcgacattaagctccgctcctgcaaaggatcctgcagcagctat
gccgagtacaacgtggaccatgagagctacgtgacgttggagaaacagatcacccagctg
gactcccagccagctcagagcatcgagtctgtggggacgctgtacgtgatgaagagcagg
cggatgcaggacaccaatgtggacagcatctacaagtccggtgccaccggtgccaccgtg
tcagctcagaggagacaggacatgttccctgatgtgaacacggtcgagttgatccttgag
gaggaagggtccagcacatccccagcaaccatctccaaggagccaggtacttcctactct
gcatctaaatcctcctccacttcctcctccacttcctcttcctcctcctccacttcctcc
tcctcctcctccacatcctcctcctcctccatcactgaactcggaggacgtggtgatggt
catttacttggtggagggtttgaagtttaccgccagcccagcacgtcccatgtctccacc
caaaccatctcctgcaccaagagcatcaggaggaccatcgtccacacaaaggacgggcca
gtggagaaggtagaggaggtgatggagggaggccccgagtgtcaggctatgacggaccac
accgggggaggaatgagctccctcttccccacccttacacacacatcctcctcctcctct
tcatctataacctccaagtcggtccacgttggtggtgccaagggaagcctcacagaagac
tccaaaacgacattcgggcatacaggttttgacctcggtgggttcctgatagacaatcca
gaggatgacattccagatttccacgcccggagtgtgaagagcgtgcgtgtcgagcggcag
gccgattatgtaggaaaagattgtgttgaagcccaccggaaccacctgaaaggggaaacg
aacggcctgtttaagatcaaacccggcggcacggactccacaggggtagtagaggtttac
tgccagcaggaggggctaatgggcgggtggttgttagtccagcagagagagagtggcgcg
ctcagctttaaccgcagctgggccgattaccgcaacgggttcggttcggtcgacgcgcac
gggaagggggagttttggctaggcaaccagaacctccacctgttgactaatcagggtgag
acgatgctgaaggtggagctcgaggattgggagggcggcgtagcaagtgctgagtacatg
gtcagggttgggtcggaggaggaggggtacccgcttcacgtgtcggggtacacaggggac
gccggggacgctctggtgaggcctaaatccgacatggcatcttatctgtcccacaacggg
atgaaattcagcaccttcgacagagacaatgataagtgggaggagaattgcgcagagatg
tatgggggtgggtggtggtacaacaactgccagtcggctaacctgaacgggatttattat
aaaggcacgtacgacccggagaaaaacgcgccgtatgagattgaaaacggagttgtgtgg
gtgacgtataaaccggccaactacagcctgaaaactgttaagatgtttatccgatcgact
gctttttaa
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