Lates calcarifer (barramundi perch): 108874860
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Entry
108874860 CDS
T04895
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108874860
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108874860
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108874860
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108874860
Spliceosome [BR:
lcf03041
]
Common components
Common spliceosomal components
SR proteins
108874860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108874860
NCBI-ProteinID:
XP_018518918
LinkDB
All DBs
Position
LG19:16328490..16475501
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AA seq
289 aa
AA seq
DB search
MSDNEKEFREQDSRPGSRSASPRGSAKSTSRSPARSKDGSRRSRSRSRSRSRSKSRSRSH
RSSRRHYSRSRSRSHRRRSRSRSRSWEYRRRRSHSRSPMSNRRRHIGNRANPDPNTCLGV
FGLSLYTTERDLREVFSKYGPLSDVNIVYDQQSRRSRGFAFVYFENCEDSKEAKERANGM
ELDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGGGGGGGGGGGGGSSRRVSRDYDRGYD
RGYDRGYDRDYDRYDDREYRSYRRRSPSPYYSRGYRSRSRSRSYSPRHY
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgagaaagagttcagggagcaggactcacggcctggctcgaggagcgcg
tcccctcggggctcggcgaaatccaccagccgctctccagcacgctccaaagatggctcc
cgtcgttccaggtctcggtctcgttctcgatccagatcaaaatccagatcccggtcccac
cgaagttcacgcaggcattactcccgctctcgttcccgctcccaccgacgccggtccagg
agccgatctcgtagctgggagtaccgccgccgtaggagccacagccgttcccccatgtca
aaccgacgcagacacattggcaacagggccaacccagaccccaacacctgtctgggtgtg
tttggactgagtctgtacaccaccgagagggatctgagggaggttttctccaaatatggc
cctttgagtgatgtcaacattgtgtatgaccagcagtcacgtcgctcgagaggcttcgct
tttgtctactttgaaaattgcgaggactccaaggaggccaaagagcgcgctaatggaatg
gagcttgatggacgcaggatccgagtggacttctccatcactaaacgagcccacactccc
actcctggaatctacatgggacgtcccacgtacggtggtggtggcggtggcggtggtggt
ggtggaggtggtggtggttcatcacggcgcgtctcgagggattacgacaggggctacgac
agaggctatgacaggggttatgatcgggactatgatcgttacgatgaccgagagtacaga
tcatacagacgcagatctccgtctccgtactacagcagagggtaccgctctcgatcccga
tcccgatcctactcaccacgtcactactga
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