Lates calcarifer (barramundi perch): 108874862
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Entry
108874862 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: sentrin-specific protease 2
KO
K03345
sentrin-specific protease 2 (axin associating molecule) [EC:
3.4.22.68
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
lcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108874862
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108874862
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108874862
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108874862
04121 Ubiquitin system [BR:
lcf04121
]
108874862
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
108874862
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C48: Ulp1 endopeptidase family
108874862
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108874862
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
108874862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C48
Peptidase_C5
Motif
Other DBs
NCBI-GeneID:
108874862
NCBI-ProteinID:
XP_018518920
UniProt:
A0AAJ7PDB1
LinkDB
All DBs
Position
LG19:16318657..16324871
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AA seq
606 aa
AA seq
DB search
MYGWIVDGISSLFEPVTGHNPTEWPGKGNVSEEIPTRPGVKAGAQRQENHGRPAKRNYQS
VDVADSVYQSDPVEVKRRRRDVVISFVKKTVAGVAGLLRLRNPLKTRCENPRHYEETQPV
TLMGIDELHTSWLNSTEWRMDKPVGGVNDRGGKNPFQSSSPPLVRKYSGTALSAGLPDRG
KDRERRGSLQLLPSRSALRVGTAYPDPTCNGVGHNRCYKPSLTVEEAIKQNNKEHYRRLL
EMVTEKYGKSQPLPFNQAKPQDESLSQSDHKPAASGKTFESVPRKTGYTATPTMFTWRNA
SAAKERWGGLTFSKSFSGGFEDTQSVRNAKKQAADLDLSTEVATRLNLVDRETPISLPDT
HSAHTAHTRHIDEDIPRLTKEMAVEVSGALAQSDPNLVLSAAFKLRITQRDLATLQEGGW
LNDEVMNFYLSLVMERCSSEAAGLKVYSFSTFFFPKLRGGGGGQAGGHAAVKRWTKAVDL
FLYDLILVPLHLGVHWAMAVIDLKSKTVRSYDSMGQRHDDICSHLLLYLKEEHKVKKGRE
LDSAKWTIGSLRATEIPQQKNGSDCGVFACKYADYIAKGRPLSFKQCHMPLFRKLMIWEI
LNQKLL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtatggatggatagttgacggaatctcgtcgctgtttgagcccgttacggggcataac
cccaccgagtggcccgggaaaggtaacgttagcgaggagatacccacgcgacctggcgtt
aaagcgggagcacagcgacaggagaatcacggcagaccggctaaacgaaactaccagagt
gttgatgttgcagacagtgtttaccagagtgatccggtagaagtgaaaagacgcaggcga
gatgtagtcatcagctttgttaagaagactgtggctggggtagcaggtctgctcaggctg
cgcaacccactgaagaccaggtgtgagaatcccagacattatgaagagacacagcctgtc
actctgatggggatagatgagctccacacctcctggctgaacagtactgagtggagaatg
gataaaccagttggtggagtgaatgataggggaggcaagaatcccttccagagctcctca
cctcctttagtgaggaaatacagtggaacagcgctctctgcaggtctccctgacaggggg
aaggacagggagaggagaggctcccttcagttgctgccctcgagatctgctctcagggta
ggaaccgcttaccctgatccaacctgcaatggtgttggacacaaccgctgctacaagccc
agtcttacagtggaagaggccataaagcagaataataaagaacattacaggcgcctgctg
gagatggtgaccgaaaaatatggcaaaagtcaaccactacctttcaaccaagcaaaacca
caggatgagtcactgtcacagagtgatcacaaacctgctgcttcagggaaaacctttgaa
tcagtccccagaaagacaggatacacagctacaccgaccatgtttacatggagaaatgca
tctgcagccaaggaaaggtggggtggcctgactttcagcaagtcattcagtggcggcttt
gaggacacacagtcggttagaaatgcaaagaaacaggcagcagatttggacctctctaca
gaagtagcgactcgcctcaacctagtagacagagagactcctatcagtttgcctgacaca
cattctgcacacacagcacatacaaggcacattgatgaggacatacctaggctgaccaag
gaaatggcagtggaggtgagtggagctctggctcagagtgatcccaaccttgttctaagt
gccgcgttcaaacttcgcatcacacagagagacctggccacgctgcaggaaggtggctgg
ctcaatgatgaggtgatgaacttttacctgtccctggtcatggagcggtgttccagcgaa
gcagcagggctaaaagtttactccttcagcaccttcttcttccctaagctgcggggtgga
gggggcggacaggctggaggacatgccgctgtgaagcgctggactaaggccgttgacctc
ttcctctacgacctcatcctggtccctctgcatctgggtgtccactgggcgatggctgtc
attgatcttaaatcaaagacagtgagatcctacgactcgatgggccagagacatgacgac
atctgtagtcatttactactctatcttaaagaggaacacaaagtaaagaaaggcagagag
ctcgacagtgccaagtggactattggaagcttgagggctactgaaattccccagcagaaa
aatggcagtgactgtggtgtttttgcctgtaaatacgctgactatatcgcaaaaggaagg
cctctctccttcaaacagtgccacatgcctctcttcaggaagttaatgatctgggaaatc
ctcaatcagaagctgctatag
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