Lates calcarifer (barramundi perch): 108874882
Help
Entry
108874882 CDS
T04895
Symbol
mta1
Name
(RefSeq) metastasis-associated protein MTA1
KO
K11660
metastasis-associated protein MTA
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108874882 (mta1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108874882 (mta1)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108874882 (mta1)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108874882 (mta1)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
108874882 (mta1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Mod_r
Motif
Other DBs
NCBI-GeneID:
108874882
NCBI-ProteinID:
XP_018518942
UniProt:
A0AAJ7LBB8
LinkDB
All DBs
Position
LG19:18090327..18134327
Genome browser
AA seq
619 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPLLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD
KHARELEEEMENPEMADLPEKQKHQLRHRELFLSRQLESLPATHIRGKCCVTLLNETEAL
KSYLDREDAFFYSLVYDPQQKTLLADKGEIRVGNKYQADITDLLKEGEEDGRDLEKLEEK
VWDPNSLLTEKQIDQFLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDT
LHTTGYDMTRAIAALVPQGGPVLCRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPW
KSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYNKPNPNQLSNNVKPALVN
GAAGAGVPGPPGSGQTPGLGRACESCYTSSSYQWYSWGPPNMQCRLCASCWTYWKKYGGL
KMPTRLDGERPGPNRNNMSPHSLPLRHSGSPKFAVKTRQAFYLQTTGLTRMTRRLCQDII
RPRYLARHPYLPVNTAAIKAECALRLPDRPKKPLPLKPVERKPLESVVRYLEAHPCPAKP
DPPARGGSISTGSLTPIKSSPILNNGSPTILGKRTYEQHNGLDGSKSKALAPQWDIMAKR
MSEAARPSASLQDEVHELD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaacatgtaccgggttggagattatgtttatttcgagaactcgtccagtaac
cctttgctgatcaggaggatagaggagttgaacaagacagccaatgggaacgtggaggcc
aaagtggtgtgtttttaccggcgtagggacatctccagcacactcatcgccctggcagac
aaacatgcaagggagctggaggaggagatggagaatccagagatggcggacctccctgag
aaacagaaacaccagctcagacacagagagcttttcttgtcccgccaactggagtcttta
cctgccacacacatcagggggaagtgctgtgtgacactgctgaatgaaacagaagccctg
aagtcctacctggacagagaggatgccttcttctactcgctggtgtatgaccctcagcaa
aagactctcctggctgataagggggagatccgcgtcgggaacaagtaccaggccgacatc
accgacctcctgaaagaaggtgaggaggatggcagagacttggagaaactagaggagaag
gtctgggaccccaacagcttactgacggagaaacagatcgaccagttcttagtagtagct
cggtcagtaggtacatttgccagagccctggactgcagtagttctgtccggcagcccagt
cttcacatgagcgctgctgcagcctccagagacatcaccttgtttcacgccatggacacc
ctccacaccacgggctatgacatgactcgagccatcgcagcgctggtgcctcagggtggg
cccgtcctctgcagggatgaaatggaggagtggagtgcctccgaggccaacctgttcgag
gaggctctagagaaatatggcaaagatttcaccgatatccagcaggattttttgccctgg
aagtccctgacgagtattattgagtattactacatgtggaagaccacagacagatatgtt
cagcagaaacgattaaaagcagccgaggcagaaagcaagttgaagcaggtctacatccct
aactataacaagccaaaccctaaccagctgagtaacaatgtaaagccagctctggtgaat
ggagcagcgggtgcaggggtcccgggacctccgggctcgggacagacccccggcctgggc
agggcctgtgaaagctgctacaccagcagctcctaccagtggtactcgtggggacctccc
aacatgcagtgtcgcctgtgcgcctcctgctggacctactggaagaagtatggagggctg
aagatgcccacaagactggatggagaaaggcctggacccaaccgcaacaacatgagcccc
cacagcctgcccctgcggcacagcggcagccccaagttcgcagtgaagacacgacaggct
ttttacctgcagaccactgggctgacacggatgacccgccgcctctgccaggacatcatc
aggccacgatatctggccaggcacccctacctccctgtcaacacagcagccatcaaggca
gaatgtgccctgcggctgccagataggccgaaaaagcctttgccactgaaacctgtggaa
cgtaaacctctggagtctgtggttcgatatttagaagcgcatccctgtccagccaagcct
gacccgccagctcgcggagggtccatctctacaggcagcctgacgcccataaaatcctct
cccatcctcaacaatggctcacccaccatcctgggaaaacgcacctatgaacagcacaac
ggactggatggctctaagtccaaagccctggctccacagtgggacatcatggccaaacgg
atgagcgaggcggcgcgaccctcggcctccctgcaggacgaggtacatgaactggactga
DBGET
integrated database retrieval system
