Lates calcarifer (barramundi perch): 108874974
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Entry
108874974 CDS
T04895
Name
(RefSeq) syntaxin-binding protein 6 isoform X2
KO
K08519
syntaxin-binding protein 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108874974
Membrane trafficking [BR:
lcf04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108874974
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec3-PIP2_bind
Synaptobrevin
RNase_J_b_CASP
DUF2761
Motif
Other DBs
NCBI-GeneID:
108874974
NCBI-ProteinID:
XP_018519112
UniProt:
A0AAJ7LBI8
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Position
LG19:complement(15752144..15812696)
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AA seq
210 aa
AA seq
DB search
MSAKSAINKEVFIPHDEKMLAAVQVKRRTKKKIPFLATGGQGDYMTFICLSVTNKKPSHL
SITKVKQFQGSSAFIKRSQWTIDQLRQVNGIDPNKDCPEFDLMFDNAFDQWVAGSAGEKC
TFIQILHHTCQRHSSARKPEFVNCQSKLLGGNSILHSAADSVTSAVQKASQALNERGERL
GRAEERTADMMNSAEQFAVTAHKLAMKHKC
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaagtcagctatcaacaaggaggtcttcataccccacgatgagaagatgctt
gctgccgtgcaggtgaagcggaggaccaagaagaagatccccttccttgccaccggtggt
caaggagattacatgaccttcatctgcctctcagtgacgaataagaaaccttcccactta
tccatcactaaggtgaagcagtttcaaggatcttctgccttcataaaaaggtcacagtgg
acaattgatcagctacggcaggtcaacggcattgaccccaacaaagactgtccagagttt
gacctgatgtttgataatgcttttgaccagtgggttgctggttcagcaggagagaagtgc
acctttatccagattcttcaccacacctgccagcgccacagctcggcacggaaaccggag
ttcgtcaactgtcagtccaaactgctggggggtaacagcatactacactcagccgcagac
agcgtgacgagtgccgtacagaaggccagccaggctctgaacgagcgcggtgagcgatta
ggccgggctgaggagcggaccgcagacatgatgaacagtgctgaacagttcgctgtcact
gcacacaagcttgccatgaagcacaagtgttag
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