Lates calcarifer (barramundi perch): 108874976
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Entry
108874976 CDS
T04895
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
KO
K06671
cohesin complex subunit SA-1/2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108874976 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108874976 (stag1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108874976 (stag1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
DUF2785
Motif
Other DBs
NCBI-GeneID:
108874976
NCBI-ProteinID:
XP_018519113
UniProt:
A0A4W6DVQ1
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Position
LG19:17167421..17207623
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AA seq
1260 aa
AA seq
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MITSELPVLQDSSNESGATDTVGLSMNMSEMEDPEAKGKKKRGRPGKQAPTSNKKPRKSP
TDKAVGVARGRGKANGVAQHNGDGGDPVTLFEVVKLGKSAMQSVVDEWIESYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPMWKKFRYN
FCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQESALIELTVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPQ
YFDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSVEELLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
RLLKAGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGAPSKDDLVALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLISGGREGLQPLVFNPDSTLQNELLNFVLDHV
FIDQDDESQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGPEFPPINLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKTGSVRSK
KGRPPLHKKRIEEESSVEGSWMMRNDTLQTPGALQTPQLTSTVLRENRPAEHMPDPDSEP
GSENDFVHNPQMQMSWLGQQKMEEVNRKDRTGMNYIKSRSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagctccccgtcctacaggactcatctaatgagtctggggcaacagac
acagtgggcttaagtatgaacatgagtgagatggaagatccagaggcgaaagggaagaag
aaaagggggaggcctggaaaacaagccccgacatccaataagaagcctcgaaaatcgcca
acagacaaggctgtgggagtggccagagggcgagggaaagcaaacggcgtggctcaacat
aatggagacggcggagaccctgtcactctgtttgaagtggtcaaactgggcaagagtgcc
atgcagtctgtggtggacgagtggattgaatcgtacaaacaagacagagacttggcactg
ctagacctcatcaattttttcatccagtgctcagggtgcaaaggcaccgtgaggattgag
atgttcaggaacatgcagaacgcagagatcatccgaaagatgacggaggagtttgatgag
gacagcggagattatcctctcaccatgccggggcctatgtggaagaagttccgctacaac
ttctgcgagttcatcagtgttctgatccgccagtgtcagtacagcatcatctacgacgag
tacatgatggacacggtgatctccctcctcaccgggctgtctgactctcaagtgcgagcc
ttcaggcacacctccacgttagcagcaatgaagctgatgacagcactggtgaatgtggca
ctgaacctgagcattcaccaagacaacacccagagacagtacgaggcagagaggaacaag
atagctggcaaacgagccaatgagaagctggagctgctgctacagaagaggaaggagctt
caggaaaaccaggatgaaattgagaatatgatgaactctatcttcaagggaatctttgtg
catcgctacagggatgcaattgcagagatcagagccatctgtattgaagagattggagtg
tggatgaagatgtacagtgatgcttttcttaacgatagctacctgaaatatgttggttgg
acactacatgataggcaaggagaggtgcgtctcaagtgcctgaaggctctgcagaacctg
tacacaaacagagaactgtttcccaagctcgagctcttcaccaaccgcttcaaggatcgt
atagtctcaatgacactggataaggagtatgatgtggctgtggaggccattcgactggtc
acactcatcctgcagggaagtgaggacgccttgtccaatgaggactgtgagaatgtgtac
cacctggtctactctgcccaccggccagtggctgttgctgctggagaattcctgcacagg
aagttgttcagtcgtcatgacccacaggcagaggaagcgctggcgaagcgcagagggagg
agcagtcccaatggaaatctcatccgcatgcttgtgctcttctttttggagagtgagctc
catgagcatgcagcctaccttgtggactccctgtgggaaagctctcaggagctgctgaaa
gactgggagtgtatgactgaacttctgctggaggagccagtgcagggagaggaggtgttg
tcagacagacaggagagtgcgctgatagagctgacagtgtgcaccattcgccaggcagca
gaggcacacccacctgttgggagaggcactggcaaacgggtgctgacagcgaaggagagg
aagacacagatagacgataagaacaaactgacagagcacttcatcatggctctgcccatg
ctcttgtccaagtatcaggcagactcagagaaagtagccaacctgctgcagatccctcag
tacttcgacctggacgtgtacagcgccgggcgcatggagaagcacctggacgctctgctg
aagcagatccggctggtggtggagaagcacatcgaaaccgacgtgctcgaagcctgcagc
aagacctacagcatcctctgctctgaagagtacaccatcatgaaccgcgtggacatcgcc
cgctcccagctcatcgacgagatgactgatcgatttgcacactcggttgaagagctgctg
caggaggctgaggaagcagatgatgatgatatctacaacgttttatctactctcaagaga
ctcacagccttccacaatgcccatgacctgacgcggtgggatttatttggaaactgttac
cggctgctgaaggcgggcatcgagcagggctccatgccagagcagatagctgtccaggct
ctgcagtgctcccactattccatcctctggcagctggtcaagatcacagagggggctccc
agcaaggatgaccttgtggctctcaggagagtggtgaagtctttcctggctgtgtgccag
cagtgcctgtccaacgtcaacaccccagttaaagagcaggccttcatgcttctctgtgac
ctactgatgatcttcagtcaccagctgatttctggcggcagggaaggcctgcagccgctg
gtcttcaacccagacagcactctgcagaacgaactcctcaacttcgtcctggaccacgtc
ttcatcgaccaggatgatgagagccagagcatggagggagacgaggaggacgaggccaac
aagatcgaggctctgcacaagaggagaaatctgcttgcagctttctgcaaactcatcatc
tacgacatcgtagacatgcccgctgctgccgacatcttcaaacactacatgaagtattat
aacgattatggagacatcatcaaggagactctcagtaaaaccagacagacagataagatt
ctctgtgccaagacactcatcctcagtctgcagcagctgttcaacgagctgctgcaggat
cagggtcccaaccttgaccgaacgtcgtctcacgtcagcggcatcaaggagttggcccgc
cgcttcgctctcaccttcggcctggatcagatcaagaccagagaggctgtggccacactg
cacaaggatggaatagagtttgcatttaagtaccagaatcctcgaggaccagagtttcct
cctatcaacctggccttcctggaggtcctgagcgaattctcctccaaactaatccgccaa
gacaaaaagactgtccactcatatctggagaagttcatgtccgagtcgatgtcggagcgt
cgagaggacgtgtggctgccgctcatctcctacaggaacagcctgctgacaggaggagac
gaggaccacatgtccgtcacgtcaggctccagcagcaaaaccggctcagtccgcagcaag
aagggacgaccgccgctacacaagaagcgcatcgaggaggagagtagtgtggagggctcg
tggatgatgcgtaatgacaccctacaaacaccgggggcactacagactcctcagctcacc
tcaacagtcctccgagagaacagaccagcagaacacatgccagacccagactcagaacct
ggatcagaaaacgactttgtacacaatcctcagatgcagatgtcgtggctcggccagcag
aagatggaggaggtgaacaggaaggaccgaacgggaatgaactacatcaagtcacgcagc
aatcagggcgttcggcagactgtgcgtgggctgatggaggatgatgcagagccaattttc
gaggatgtgatgatgtcatcgcggggtcagctggaggacatgaacgaggagtttgaagac
actatggtgatcgacctgccgccatcgaggaacagacgtgaaagagcagaattaagaccg
gacttcttcgactccgcagcaatgattgaggacgagtcgggattcagcatgcccatgttc
tga
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