Lates calcarifer (barramundi perch): 108875006
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Entry
108875006 CDS
T04895
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04110
Cell cycle
lcf04114
Oocyte meiosis
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108875006
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108875006
04114 Oocyte meiosis
108875006
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108875006
09158 Development and regeneration
04382 Cornified envelope formation
108875006
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108875006
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108875006
03036 Chromosome and associated proteins [BR:
lcf03036
]
108875006
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108875006
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108875006
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108875006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
108875006
NCBI-ProteinID:
XP_018519160
UniProt:
A0AAJ7PDK9
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Position
LG19:13796527..13812951
Genome browser
AA seq
525 aa
AA seq
DB search
MLTCNKSGDRMVVDAPNSNGPFQPVALMHFRDVAPAEQEKLFIQKLRQCCVLFDFLSDPL
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVMQLLELFDSEDPRERD
FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
EVMFLNELEEILDVIEPSEFVKVQEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
DNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEK
AKSKEREEAWIKIENLAKSNPQFSMYVDSSDLNSPVAMETDVPLIEDVQRLKKTVEEGAT
QLQHDQRKERPMVRRKSELPQDIYTTKALESHRRAEDMLTTHDGL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatgcaataaatctggagacaggatggttgtggatgcacctaattccaatggg
ccttttcagccggtggctcttatgcacttcagagatgtggcccccgcggagcaggagaag
ctcttcatccagaagctacgacagtgctgcgttcttttcgacttcctgtctgacccgctg
agcgacctgaaatggaaggaagtgaagcgggcggcgctgagcgaaatggtggagtacatc
acccacaacaggaatgtcatcacagagcccatctacccggaggtggtgcacatgtttgca
gtgaatatgttcagaacattgcctccgtcgtccaaccctaccggcgcagagtttgatcca
gaagaagatgaaccaacacttgaagcggcgtggccacacctccagctcgtctatgaattt
ttccttaggtttttagaatcgcccgactttcagccgaacatagcaaagaaatacattgac
cagaaatttgttatgcagctcctagaactatttgacagcgaggatcccagagagagggac
ttcctcaaaactacactccacaggatctatggaaagttcttggggctgagagcgtacatc
agaaaacagatcaataacattttctataggtttatctatgagacagagcaccataatggt
atagctgaactactggaaatacttggaagcataatcaatggatttgccttaccactaaaa
gaagagcacaaaattttcctgttgaaggttttattgcctctgcacaaagtcaaatcactc
agtgtctaccatccacagctggcttactgcgtggtgcaatttttggaaaaggacagcact
ctaactgagccagtggtaatggctctactaaagtactggccaaagactcacagtcccaag
gaagtgatgttcctcaatgagctggaggagatcctggacgtcatcgagccctctgagttt
gtgaaggtgcaggagcctctgttcagacagctggccaagtgtgtgtccagcccgcacttc
caggtggccgagagagctctgtactactggaacaacgaatacatcatgagtctgatcagc
gacaatgcagcgaagattctgccgatcatgttccccgctctgtaccgcaactcaaagacc
cactggaacaagaccatccacggcctcatctacaacgctctgaagcttttcatggagatg
aatcagaagctctttgatgattgcacacagcagttcagggctgagaaaaacaaagagaag
gcaaagtcaaaagaacgcgaggaggcttggatcaagatcgagaaccttgccaagtcaaat
ccacagttctctatgtatgttgattcctctgacctcaatagtcctgtagcaatggagacg
gatgtccctttgatagaagatgttcagaggttaaaaaagacagttgaggagggcgcgact
cagttgcagcatgaccagcggaaagagcggcccatggtgcgacgtaaatctgagttgcct
caggatatctacaccacaaaagccttggagtcccaccgcagagctgaagacatgttgacc
acccacgatgggctctag
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