Lates calcarifer (barramundi perch): 108875009
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Entry
108875009 CDS
T04895
Symbol
ythdf2
Name
(RefSeq) YTH domain-containing family protein 2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108875009 (ythdf2)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108875009 (ythdf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
108875009
NCBI-ProteinID:
XP_018519166
UniProt:
A0AAJ7PE17
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All DBs
Position
LG19:complement(14379147..14387204)
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AA seq
639 aa
AA seq
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MSASSLLEQRPKGQGNKVQNGAVTQKDTLNDDEFEPYLNTQARQSNAYTAMSDSYMPSYY
SPSIGFSYSLNEAAWSTGGDPPMPYLASYGQLSNGEPHYLPDAMFGQPGPLGSNPFLGQH
GFNFFPSGIDFSAWGNSSSQGQSGTPQSSGYSSSYAYAPSSLGGAMIDGQSPFAPAANEP
LNKAPGMNSLDQGMAGLKISGAAPGGNGDMTPKVVGSGLPGGGPLGPVSSVGPPSMPPVS
IAPAKPASWADIASKPAKPQPKLKTKGGMAGANLPPPPIKHNMDIGTWDNKGTMPKAATP
QQVPPIPSNGQPPNQASPQPGATAAGNPQMPLSNGQLVPPVSQMGQHQLPPSGQPGMAPM
PQPPLSQGPPPPPSQQQQPSQPTRWVPPRNRANGFGEAGGSGTGQSPPTSSGVGVVPGVP
SEPHPVLEKLRMVNNYNPKDFDWNPKQGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRL
DTAYRSLGGKGPLYLLFSVNGSGHFCGVAEMRSPVDYNTSAGVWSQDKWKGRFDVRWIFV
KDVPNSQLRHIRLENNENKPVTNSRDTQEVPLDKARQVLKIIAGYKHTTSIFDDFSHYEK
RQEEEECVKKVEVQGSEPYPSNPSNRTHYRLQERQGRVK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagcagccttcttgaacagagaccgaaaggccaaggtaataaagtgcaaaac
ggagctgtgacccaaaaggatactttgaatgacgatgagtttgagccttacctgaatact
caggccagacagagcaatgcctatacggccatgtcggactcgtacatgcccagctactac
agcccctccataggattttcctactccctaaatgaggcagcatggtccacaggtggggac
cctcctatgccttacctggcctcctatggacagctgagcaatggggagccccactacctc
ccggacgctatgtttggccagccaggccctctggggagcaaccctttccttggtcagcac
ggcttcaacttcttccccagtggcatcgacttctcggcgtggggcaatagcagctctcag
ggacagtcggggacaccgcagagctctggctacagcagcagctatgcctatgctcccagc
tcccttgggggtgccatgatcgatggacagtccccatttgcacctgctgccaatgagccg
ctcaacaaggcacctggtatgaacagccttgaccagggcatggcggggcttaagatcagt
ggtgctgctcctggtggtaatggggacatgactcctaaggtggttggctctggcttgcct
ggtgggggtccccttggccctgtatcatctgtaggacctcccagcatgcctcctgtctca
attgcccctgccaagcccgcctcctgggccgacattgccagcaagccagccaagcctcaa
cccaagctgaaaaccaagggtggcatggccggtgccaatttgcctcctccgcccattaaa
cacaacatggacatcggcacttgggacaacaagggtaccatgcctaaagctgccacccct
cagcaggtgccccctatccccagcaatgggcagccgcccaatcaggcttccccacagccc
ggagctactgctgcagggaacccacaaatgcccctcagcaatggacagctggtaccgcct
gtttcccagatggggcagcatcagcttccacccagtgggcagccaggtatggctccaatg
ccccagcctccactttcccagggccctcctcctccaccaagccaacagcagcaaccatct
cagcctactcgttgggtccctccacggaaccgggccaatggttttggggaagctggtggg
agtgggacaggccagtcacctcccacctcttcgggggtgggtgttgtacctggggtcccc
tctgagcctcacccagtcttagagaagttgcgtatggtcaacaattataatcccaaggac
tttgactggaatcccaagcagggccgggtgtttatcatcaagagctactccgaggatgac
atccaccgctccatcaagtataacatctggtgcagcacggagcacggcaacaagaggctc
gacacggcctaccgttcgctgggtggcaaagggccactttatcttctgttcagtgtcaat
gggagtggtcacttctgtggcgtagcagagatgcgctcacccgtggactacaacacgtct
gctggcgtgtggtcacaggacaagtggaagggtcgttttgatgtgcgctggatctttgtt
aaggacgttcccaacagtcagctgaggcacattcgactggagaacaacgaaaacaagcca
gtgaccaactctcgggacacacaggaggtaccactggacaaggccaggcaggtgctaaag
atcatcgctggatataaacacaccacttccattttcgatgacttttctcactacgagaag
cgtcaggaggaggaagagtgtgtgaaaaaggtggaggtccaaggcagtgagccatatccc
agcaacccaagcaacaggactcattacaggcttcaggagcgccaaggacgagtcaagtaa
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