Lates calcarifer (barramundi perch): 108875028
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Entry
108875028 CDS
T04895
Name
(RefSeq) cannabinoid receptor type 1B
KO
K04277
cannabinoid receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108875028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108875028
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Others
Cannabinoid
108875028
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Meckelin
Motif
Other DBs
NCBI-GeneID:
108875028
NCBI-ProteinID:
XP_018519189
UniProt:
A0A4W6F1Z9
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Position
LG19:complement(13496576..13501297)
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AA seq
476 aa
AA seq
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MKVALHRIAGATMSTLTTGVQYLGSNDASYNDPSLDSSIVKNKFHFEKPHSASISNPLTG
LIPGNKEVIYNGLSPILPTNISDILLGNGTSVESGGGAQCGENFVDNMECFMILTPGQQL
AVAILALTLGTFTVLENLMVLCVILHSQTLRSRPSYHFIGSLAVADLIGSIIFVYSFLDF
HVLHRKDSPNIFLFKLAGVIASFTASVGSLFLTAIDRYISIHRPMAYKRIVTKTKAVIAF
SMMWTISIVISLLPLLGWNCKRLNSVCSDIFPLIDQKYLMFWIGMTSILVLFIIYAYMFI
LWKSHHHAVRMLSRSSQRSVIVYTAEGTKVQTVRPEQARMDLRLAKTLVLILVALIICWG
PLLAIMVYDLFGKVNDFIKTVFAFCSMLCLLNSTVNPVIYAMRSKDLRRAFLNICQVCRG
TTQTLDNSAESDWNSRSVRGTAGGAGKNGAGCGNTRVKVAQVTVSGVTETSTAEPV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggctttgcacaggatagcaggcgccacgatgagcacgctgacaacaggtgtc
cagtatctgggctccaacgacgccagctacaacgacccctccttggactcgagcatcgtc
aagaacaagttccacttcgagaagccccactccgcctcgatcagcaaccccctcactgga
ctcatccccgggaataaggaggtcatttacaatggcctctctcccattttacccaccaac
atatcagacatcctgctgggcaatggcacctctgtggagagtggaggaggagcacagtgt
ggggaaaactttgtggacaacatggagtgttttatgattctgacgcccggtcagcagctc
gcggttgccatcttggcgctcaccctgggtacgtttacagtgctggagaacctcatggtg
ctgtgtgtgatccttcactctcagacgcttcggtctcggccctcctaccacttcataggc
agcctggctgtggctgatctgataggaagcatcattttcgtctacagcttcctggatttc
cacgtcctccacaggaaggacagcccaaatattttcctcttcaagctggctggggtcatc
gcctccttcacagcctctgtaggaagtctgtttctcactgccattgaccgctacatctcc
atccacaggcccatggcatacaaacgcatcgtcacaaagactaaagcggtcatcgccttt
agcatgatgtggacaatctccatcgtcatctcactgctgccactgctgggctggaactgc
aagcgtctcaactctgtctgctcggacatcttcccgctaatcgaccagaagtacctgatg
ttctggattgggatgacaagcatcttggtcctgttcatcatctacgcctacatgttcatc
ctctggaagtcccaccaccacgctgtccgcatgctgagccgcagctcccagaggagcgtg
attgtctacactgcagaagggactaaagtccagacggtcagacctgagcaggcccggatg
gacctccgcctggcaaaaaccctggttctgatcctggtggccctcatcatctgctggggc
ccactcctagccatcatggtttacgacctctttggcaaggtgaacgacttcatcaagacc
gtgttcgccttttgcagcatgctgtgcctgctcaactccactgtgaaccctgtgatctac
gcaatgaggagcaaggacctgcgcagggccttcctcaacatctgccaagtgtgccgagga
acgacgcagactctggacaacagcgcagagagtgactggaacagcaggagtgtgagagga
acagcaggcggggcggggaaaaacggagccggctgtggaaacacccgtgtgaaagtagcc
caggttaccgtttctggagtgactgagacttctactgcagagccagtttaa
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