Lates calcarifer (barramundi perch): 108875034
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Entry
108875034 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: kelch-like ECH-associated protein 1A
KO
K10456
kelch-like protein 19
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108875034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108875034
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108875034
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Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_6
Kelch_2
Kelch_3
BACK
BTB
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
NANM
BTB_KLHL33
Kelch_5
Motif
Other DBs
NCBI-GeneID:
108875034
NCBI-ProteinID:
XP_018519198
UniProt:
A0AAJ7LDS0
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Position
LG19:complement(16651588..16668749)
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AA seq
601 aa
AA seq
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MHCPMRKRRPTRDSDFSAIVVPSMHGSGYLDYTVETHASRSLKVMDEFRRQEMLCDLVLH
VTYKEKTVDFKVHRVVLASCSPYFRAMFTSSFKECRASEITLRDVCPQVVGRLIDFAYTS
HITVGEKCVLHVLLAAMRYQIEDVAKACCDFLVKHLEPANVIGIARFAEEIGCTELHQKS
REYINTHFNEVTKEDEFFSLTHCQLLELISQDSLKVLCESEVYKACTDWVGWDMEGRAQY
LHALLNAVHIYALPPKFLKNQLLSCPILSKANSCKDFLSKIFQDMTLRKLPPGPNRGTQL
IYVAGGYRQHSLASMEAYDPRRNVWLRLADMGTPCSGLGACALFGLLYTVGGRNLSLQNN
TESSALYCYNPMTNQWSQRASLNIPRNRVGVGVVDGCIYAVGGSQGSTHHNTVERWDPES
NRWSFVCPMSVARLGAGVAACGGALYVAGGYDGQNRWSTAEKYQPDTNTWQQLAPMSTIR
SGLGLVCVNFYLYAVGGYDGRNQLSSVERYNIARNVWEPRASMQYCRSAHGVTVYQRRIF
VFGGFNQHGFLPSVECYCPDRNEWTCITEMPVGRSGMGVAVTMEPCPGSLPEPEEDEDRA
T
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcattgccctatgaggaagagacgtcccacgcgtgattctgatttctcagctattgta
gttccctccatgcatgggtcagggtaccttgactacacagttgagacccacgcctccaga
tcgctgaaggtcatggacgagttcagacggcaggagatgttgtgtgacctggtgctgcat
gtcacatacaaggagaaaacagtggacttcaaggtgcacagggtggtcctggcctcctgt
agcccctacttcagagccatgttcaccagcagcttcaaagagtgtcgcgcctcagagatc
accttgcgagatgtttgcccccaggtggtgggaaggctcattgactttgcctacacctcc
cacatcacagtgggagagaaatgtgtgttgcacgttcttttggctgctatgaggtatcag
atagaggatgtggcaaaggcatgctgcgatttccttgttaaacatctagagccagctaat
gtcattggcatcgctcgctttgctgaggagattggctgcacagagctgcaccaaaaaagc
agagagtatatcaatacacacttcaatgaggtgactaaagaagatgagttcttcagcctc
actcactgtcaactgctggagctcatcagtcaggacagtctcaaggtgctctgtgagtct
gaggtgtataaggcctgtacagactgggtcggctgggacatggagggtagagcccagtac
ctacatgccctcctgaatgcagttcatatctacgctctgcctcctaagttcctgaagaac
cagctcctgtcctgccccatcctcagtaaggctaattcctgcaaggacttcctctctaaa
atcttccaggacatgacactgaggaagctgcctcctggaccgaaccgtggaactcagctc
atctatgtggctggaggataccggcagcattcacttgcctccatggaggcttatgatccc
aggagaaatgtctggctaaggctggctgacatgggcactccatgcagcggtctgggagcc
tgcgcgctgtttggactgctctacactgttgggggcaggaatttgtcgcttcaaaacaac
acggaatccagcgccctgtactgctataacccgatgaccaaccagtggagccagagagcc
tccctcaacatccccaggaacagggtcggggtgggcgtggtggacggctgcatctacgcc
gtcggaggttcccagggctcgacacatcacaacacggtggagaggtgggatccagagtct
aatcgctggtcctttgtttgcccaatgtcggtggctcgtctgggggctggcgtggcggcg
tgtgggggggctctgtacgtggcggggggatatgacggacagaaccgctggagcaccgct
gagaaataccagcctgacactaacacctggcaacagctggctcccatgagcaccatacgc
agcgggctggggttggtgtgtgtgaacttctacctgtacgctgtaggggggtatgatggg
agaaaccagctgtcctctgtggagcgatacaacatagccaggaatgtctgggagcccagg
gcctccatgcagtactgccgcagtgcgcatggagtgacggtctaccagagacgaatcttt
gtcttcggagggtttaaccagcacggcttcctgcccagcgtcgagtgttactgtccggac
agaaacgaatggacatgcatcaccgagatgcctgttggacggagcggcatgggcgtcgcc
gttaccatggagccctgccctggcagcctgccggaaccagaggaggatgaggacagagcc
acgtag
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