Lates calcarifer (barramundi perch): 108875036
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Entry
108875036 CDS
T04895
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04114
Oocyte meiosis
lcf04218
Cellular senescence
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04270
Vascular smooth muscle contraction
lcf04510
Focal adhesion
lcf04810
Regulation of actin cytoskeleton
lcf04910
Insulin signaling pathway
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108875036
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108875036
04218 Cellular senescence
108875036
09144 Cellular community - eukaryotes
04510 Focal adhesion
108875036
09142 Cell motility
04810 Regulation of actin cytoskeleton
108875036
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108875036
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108875036
04270 Vascular smooth muscle contraction
108875036
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108875036
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108875036
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108875036
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108875036
03041 Spliceosome [BR:
lcf03041
]
108875036
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108875036
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
108875036
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108875036
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108875036
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108875036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
108875036
NCBI-ProteinID:
XP_018519201
UniProt:
A0AAJ7LD89
LinkDB
All DBs
Position
LG19:16038613..16053779
Genome browser
AA seq
327 aa
AA seq
DB search
MAEGELNVDSLISRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDESLMCSFQILKPSEK
KAKYQYGGVNSGRPVTPPRTTQAPKKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtgaattgaacgtggacagtctcatctctcggcttctggaagtgcgggga
tgtcgcccggggaagatagttcagatgaccgaggcagaggtgcgaggcctctgcatcaaa
tccagggagatcttcctcagccaacccatcctactggagcttgaggcgcccctgaagatc
tgtggtgatatccatgggcagtacacagatctgctgaggctgtttgagtacggtggcttc
cctcccgaggcgaactaccttttcctgggcgactacgtggacagagggaagcagtccctg
gaaaccatctgccttctgttggcctacaagatcaaatacccagagaactttttcctgctc
aggggcaaccacgagtgtgcttccatcaaccgcatctacggcttctacgatgagtgtaag
cgcaggttcaacattaagttgtggaagaccttcactgactgctttaactgcctgcccatt
gctgctattattgatgagaagatcttctgctgccatggagggctatcgcctgatttgcag
tcaatggagcagattcgcaggatcatgaggccaacagacgtgcctgatacaggcctgctg
tgcgacttgttgtggtcagacccggacaaggacgtacaaggctggggagagaacgaccgc
ggggtctccttcaccttcggggccgatgtggtcagcaagttcctcaaccgccatgacctg
gacctcatctgcagagcccaccaggttgtggaggatggatacgagttctttgccaaacgc
caactggtcacacttttctccgctccaaactactgcggggagtttgacaacgcaggcggc
atgatgagcgtcgatgaatccctcatgtgctccttccagatcctaaagccctcagagaag
aaggccaagtaccagtacggtggtgtaaattctggtcgacccgtcaccccaccccgcacc
acccaagcccccaagaagaggtga
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