KEGG   Lates calcarifer (barramundi perch): 108875066
Entry
108875066         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: codanin-1
  KO
K19531  codanin-1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108875066
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     108875066
SSDB
Motif
Pfam: Codanin-1_C VMAP-M8 VGCC_beta4Aa_N
Other DBs
NCBI-GeneID: 108875066
NCBI-ProteinID: XP_018519236
LinkDB
Position
LG19:complement(17942549..17953530)
AA seq 1366 aa
MPRPRPLSPAAAQRPDRMAALLESLLLKKVDVNTVVDWLKNLEEHDKLSLSKPGVTVHKQ
EFVPFLLNFLRDQSSQALTHGPATPAKTPSRPRPAAQTQGFTDRRGCRSAGGAGSRSASR
IQLFSPATSVSPDTEMDAAGQSGSHCLSGVSALSSPSFTTTWSPASRPSGYERRPGQRIS
LGDYMVSPPDLQHSPNLQSQKGRRRSGAGGGGIAVGGQGRHGGGRGGHHSDENGRWDSGG
RRSGRGGGGGGGGYSRISEQVSPPSVGQLNFNNLEDFPPVGSSPVSPVASKPSRRINPTP
VSAERPHSKPKTCFTSTPFRKLSSPPSGGEVLQGPMTVSSPLSLQEERELLKREKTKRAQ
QVSSPLPSSLDPCTPTKSGLRTGSKVTPDLQTPCPEPSKVTFSTELDLLAELYCTCISEN
LVPNIFLELFFVMQLLTSQSPHTHDDDEQESLCAVNSDVLERCYLRQVHNCVHFAVKVLE
NQFQLVAHLDKCTLRLLAENERVASFSPGLRDRLTQAQDRSTATLSPSVSTFIHSVPFRP
ATDNRSNFGSDKAFHTFKKQRDIFYEVLREWEDFHMEPGWNFDAALGSRIRGMMSQLTSA
GNHSHFARLFLKQLVQMCKGPRVNSSPGDTPDTDLLGMLGADSLGRLKRLEERLIQPHGV
VGPCPPPSFPGHQEFFRDFLQTASCCQLNQHLQDSLCQQLLQLDEVSILSPPASIGEGEE
EGDGDMEHQDEKQRFTSVLLLARLLAKFLGFISFLPYQTSERPSREIQETAVALRSKSVP
VLDVCAVLSNSVRRRRTILTVPWLVEFLSMLDFIGPLLLSYRTALGTLLLLYRRMLLGRS
GEMCYLNKLLMVSVLGWLFQIPVIPEDIFFTSEFTEVAKLEDSNTSGAGLDCIPLVGQQL
LYTCCPFLGEFRKLLAAFVSGSTAKSGGIIRKITPTSAELRDTPAANRSQQKLQVDLEQA
FFHNQPPSLRRTVEFVAERIGSNGVKHMKATLVSELVERGEKMLRDGLELPNSNPSKLND
SICAQLCDAGLEAMARATRFCCEKSPEAIRILLPEETSSAVLTTSENITKRLATEKACSW
LSANITALIRREWKTRYDRVMKALGSPVAPDVGDTERAADELVTQEQSTTPKRKRGSERV
ISCPPHCNHSASLPSDILIEMKEWLSIAVGPRTDEELPTSSQLITLLQRVGDTLACRKFS
TVMSEQMLLNCTVLLACKLVSAELPVQSLSGCSGGGEVIVGPGSGSEPPVRSVLEQLAEL
WERDCCSSAPLHLLFTPLTVTAVLKASDTEWNNYLFLVRKLVDRGILGEEEVISHWKKLT
NLALPAELIEKFQLQSQSIKPPLPLADLQSHMDMLQVSHQTVEGAT
NT seq 4101 nt   +upstreamnt  +downstreamnt
atgccccgcccccgtcctctcagtcctgcagccgcgcagcgccctgacagaatggcggct
cttttggaatcactgctgttgaagaaagtggacgttaatacggtcgtagactggctgaaa
aatctcgaggagcacgacaagctgtcactcagcaaacctggggtgacagttcacaaacag
gaatttgttccttttcttttaaacttcctgagagatcagagcagtcaagcactaacccat
ggccctgccacaccggccaagacccccagccgtcccaggcctgctgcacagacccaaggc
ttcactgacaggaggggctgcaggtctgctggtggtgctggttcacggagtgccagccgg
atccagctgttttctccggccacatcagtttcacctgatactgagatggatgctgctggt
cagtcaggatcccactgtctgagcggggtcagtgccttaagcagcccttcctttacaaca
acctggagccctgcctccaggccctcaggctacgagcgccggcctggccagaggatcagt
ctgggggactacatggtttctccaccggacctccagcacagccccaacctgcagtcacaa
aagggccgcaggaggagtggtgctggcggtggtggcattgctgtcgggggacaaggaaga
catggaggagggcgtggaggacaccacagtgatgagaatggacgatgggacagtgggggg
aggaggtcaggcagaggaggaggaggaggaggaggagggtacagtaggataagtgagcag
gtttcacctccatctgtgggtcagctcaacttcaacaacttggaagattttcctcctgtt
ggttcatcaccagtttcaccagtggcatccaaaccatctagaagaataaacccaacacca
gtcagtgcagagcggccacactccaaaccaaagacctgcttcacttccactccattcagg
aagctctctagccccccatcagggggagaggtgcttcagggaccgatgacagtgagcagt
cctctgagcctgcaggaggaaagggaactacttaagagggagaaaaccaagcgtgcccag
caggtcagctctcctctgccctcctctctggatccttgcacccccaccaagtcagggctt
aggactggatctaaagttacacctgacctgcagacaccttgtcctgaaccatccaaagtc
accttctccacggaactggatctcttggcagagctgtactgtacctgcatttctgaaaat
ctcgtgccaaacattttcctggagcttttctttgtgatgcagttgctaacgtctcagtcc
cctcacactcatgatgatgacgaacaggaaagtttgtgtgctgtaaattcagatgttctg
gagagatgttatctaagacaagtacacaactgtgtgcattttgcagtaaaggttctggag
aatcagtttcagttggtcgctcatctcgacaagtgtacattgcgtctactggcagagaat
gagagggtggcatctttctctccaggtctcagggatcgtcttactcaagcccaggacaga
agcacagccacgctttctccctcagtttccactttcatccactcagtcccgttccggcct
gctacggacaacaggtccaactttggaagtgataaggccttccacacctttaaaaaacag
agggatattttttatgaggtgctgcgggaatgggaggactttcatatggaaccaggatgg
aactttgatgctgcgttagggagcaggataagaggaatgatgagtcaactgacctctgca
ggaaaccattcccattttgcacgtctgttcctgaagcagcttgttcagatgtgtaaaggc
ccccgtgtgaacagctcccccggggatacccctgacactgacctgctaggtatgctggga
gctgacagcttggggcgtctgaagcgccttgaagagcgtctcattcagcctcatggagta
gtcggcccctgtcctcctccatccttccctggccaccaggagttcttcagagacttcctg
cagacagctagctgctgccagctgaaccagcacctgcaggacagcctgtgtcagcagctc
ctgcagctggatgaggtgtccatcctgagcccccctgcttccattggtgagggagaggag
gagggagatggagacatggagcatcaggatgagaagcagcggttcacctcagtgctactc
ctcgctcgtcttctggctaagtttcttggatttatttcttttctgccttaccaaacatct
gagagaccatccagagagattcaggagactgctgtagccctgcgcagcaagagcgttcca
gtgctcgatgtgtgtgctgtgctgagtaacagtgtgagaaggaggcgcaccatccttact
gtcccctggcttgtggagttcctctccatgttggactttattggtcctctgctgctcagc
tacaggactgcgttaggcacactgctcctcctgtacaggagaatgctgctgggcagaagt
ggagaaatgtgttacctgaacaagctcctaatggtgtctgtattagggtggcttttccag
atcccagtgattcctgaggacattttcttcaccagtgagttcactgaagtggctaagctg
gaggacagcaacacaagtggtgcaggacttgactgcattcccctggtgggtcagcagctt
ctctatacgtgttgtccatttcttggtgagtttcgtaagcttctagctgcctttgtgtct
ggaagcacggccaaaagtggaggaattatccgcaagatcactcccacttctgctgagctc
agggatacgccagctgccaacaggtcccagcagaaactacaggtggacctggagcaagcc
ttctttcacaaccagcctccgtcattgcgccgcactgtggagtttgtagctgagagaatt
ggatccaatggcgtcaagcatatgaaggccacattagtgagtgagttggtggagagagga
gagaagatgctgagagatggactggagttgccaaactcaaatccttcaaaactgaatgac
tccatctgtgctcagctgtgtgatgctggattggaggccatggcacgagccacgagattt
tgttgtgagaagagtcctgaagccataagaattctgctccctgaggagacctcctctgct
gttctgaccacatctgaaaatatcaccaaacgtcttgcaacagaaaaagcctgcagctgg
ctctctgccaacattacagcgctcataaggcgcgagtggaagaccagatatgaccgtgtg
atgaaggctctaggtagccctgtggctccagacgtgggggacacggagcgggctgcggac
gagttggtcacccaggagcagtcgactactcccaagagaaaacgaggaagtgagagagtg
atctcctgccctccacactgcaaccacagtgcttcactgccctcagacatcctcattgag
atgaaggagtggttgagcatcgcagtaggtcccaggactgatgaggagctgccaaccagc
tctcagctcataacgctgctccagagagtgggagacacactggcctgcagaaagttttca
actgtgatgtcagagcagatgcttctgaactgtactgtcctactagcctgcaaactagtg
tctgctgagctgccggtacagtctctgtcagggtgcagcggaggtggagaggttattgtg
ggtcctggttcggggtcagagcctcctgtcagatcagtgctggagcagcttgctgagctg
tgggagagagactgctgctcctccgcccccctccacctgctgttcaccccgctcactgtc
actgctgtgctgaaggccagcgacactgagtggaacaactacctgttcctggttagaaag
ctggttgacagaggaatcttgggcgaggaagaggtcatatctcattggaagaagctaaca
aacttggccttgccagcggagctgatagagaaatttcagctgcagtcacagagtattaaa
ccccccttgcctctggctgacttacaaagtcatatggacatgctgcaggtctcacatcag
acagtagagggcgctacgtga

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