KEGG   Lates calcarifer (barramundi perch): 108875076
Entry
108875076         CDS       T04895                                 
Symbol
cldn11a
Name
(RefSeq) claudin-11a
  KO
K06087  claudin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03272  Virion - Hepatitis viruses
lcf04382  Cornified envelope formation
lcf04514  Cell adhesion molecules
lcf04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    108875076 (cldn11a)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108875076 (cldn11a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108875076 (cldn11a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    108875076 (cldn11a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lcf03037]
    108875076 (cldn11a)
   04147 Exosome [BR:lcf04147]
    108875076 (cldn11a)
   04515 Cell adhesion molecules [BR:lcf04515]
    108875076 (cldn11a)
Cilium and associated proteins [BR:lcf03037]
 Other cilia and associated proteins
  Stereociliary proteins
   108875076 (cldn11a)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   108875076 (cldn11a)
  Exosomal proteins of colorectal cancer cells
   108875076 (cldn11a)
Cell adhesion molecules [BR:lcf04515]
 Immunoglobulin superfamily
  L1 family
   108875076 (cldn11a)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 OppC_N
Other DBs
NCBI-GeneID: 108875076
NCBI-ProteinID: XP_018519258
UniProt: A0A4W6CU08
LinkDB
Position
LG19:complement(17582941..17587559)
AA seq 219 aa
MANSCLQLSGFLISCLGWLGIVIATATNDWVTMCKYGLNTCKKMDELGAKGPWAECVIST
GLYHCVSLTQILDLPAYIQTTRALMITGSILGLPAVGMLLMSMPCINLGNESQTSKNKRA
ILGGVLILIVALCGMVSTVWFPIGAHHEQGLMSFGFSLYTGWVGTIFSMLGGSILTCCSS
ESSSSSRSYQDNNRFYYSKQGGGNQPTASATNHAKSAHV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcgaactcgtgtctccaactgagcggcttcctcatcagctgcctcggctggttggga
atagtgatcgcgacagctaccaacgactgggtgactatgtgtaaatacggtttgaacacc
tgcaagaagatggatgagctaggggctaagggaccttgggcggagtgtgtcatctccaca
ggactataccactgcgtctccctcacgcagatcctggacctgccagcctacatccagacg
actcgtgccctgatgatcacaggttcaatcctaggtctcccagcagtgggaatgctcctc
atgtccatgccctgcatcaaccttgggaacgaatcccagacctctaaaaacaaacgtgcc
atcctgggaggagtgcttattctcatagtcgcattgtgtggaatggtatctacagtctgg
tttcccattggggcccaccatgagcagggcctcatgtcatttggcttctccctctacact
ggctgggtgggcactattttctccatgctgggtgggtccatcctcacctgctgttcatca
gagtcctcctcctcctctcgctcctaccaggacaacaatcgcttctactactccaaacag
ggaggaggaaaccagccaaccgcctctgccaccaatcacgccaagagcgcccacgtctga

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