Lates calcarifer (barramundi perch): 108875077
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Entry
108875077 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108875077
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108875077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108875077
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Others
Platelet activating factor
108875077
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Ortholog
Paralog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srd
Motif
Other DBs
NCBI-GeneID:
108875077
NCBI-ProteinID:
XP_018519261
UniProt:
A0AAJ7LBQ8
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Position
LG19:complement(14747120..14752422)
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AA seq
392 aa
AA seq
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MFDPTTERAVVTGNSGPVPTASNVSFLDSEFRYVLFPVAYGIIFILGLFANLYVLFVLQS
LREAKAMGEIRIYMTNLTIADLLFVCALPFWVGYYSRHGNWVYTDFMCRLTGSLFFINTY
CSILFLGAISVNRYWAVTRPLDAASSDHRRRGIIVCIVIWALTVAMAVPFLVSPGTNTDE
NNNTRCFEGYQSETDVQKKTVAAFHFAIIAMFFVIFFLVVVCNSLIARALLSQKPPQSEF
QICYNTSRKSHRTMSSAAQRPRGVKRRALQMLLAVVGVFSLCFLPHHVIQGFWTLAVLQI
KNGWGHVDWDQDTLQMLNDAHQITLLLMGLNCILDPVVYFFATRKFRRFIVSHIKRLGKG
EGCSNTVISQISMDSRNQSQKLHSENQQPEMD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatccaaccacagaacgagctgtcgtgacaggaaactctggtccggtccctaca
gccagcaatgtctcattcttggactctgagtttcgttatgtcctcttcccagttgcctat
ggcatcatcttcatcctgggcctctttgctaacctctacgtgctgttcgtcctgcagtcc
ctccgggaagctaaggccatgggcgaaatccgcatctacatgaccaacctaaccatcgcc
gatctcctttttgtgtgcgcccttcccttctgggtcggctattacagtcgacacggtaac
tgggtctacacagacttcatgtgccggctgacggggtcattgttcttcatcaacacctac
tgctccattctcttcctcggagccatcagtgtcaaccggtactgggcagttacccggcct
ctggacgcagcctcctcagaccataggcgccgtgggattatcgtgtgcattgtcatctgg
gcattgaccgtagcgatggctgttccatttctggtatcgccagggaccaacactgacgag
aacaacaacactcgttgttttgaggggtaccagagtgaaacagatgtgcagaagaaaaca
gtggctgcctttcattttgcaataattgcaatgttttttgtcatcttttttcttgttgtg
gtgtgcaattcccttattgctcgggcattactctctcaaaaacctcctcaatcggaattt
cagatctgctacaatacatccaggaagtcccacaggaccatgtcctctgcagctcaaagg
cccagaggggtgaaacggagggctctccagatgttgctggcagtggtgggagtgttttct
ctgtgtttcctgccccaccacgtaatccaaggtttctggacactggcggtgttgcagatc
aaaaacggctggggccacgtggactgggaccaggatactcttcagatgctcaacgacgcg
catcagatcaccttgcttctcatgggcctcaactgcattttggaccctgtagtttatttc
ttcgccacaaggaagtttcgaaggttcatcgtgtcccacattaaaaggttaggaaagggg
gaagggtgttcaaacacagtcatctctcagatctctatggacagcaggaatcagagccag
aaacttcacagcgagaaccaacaaccagaaatggattga
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