Lates calcarifer (barramundi perch): 108875146
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Entry
108875146 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108875146
Cell adhesion molecules [BR:
lcf04515
]
Cadherins
Cadherin related
108875146
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GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
108875146
NCBI-ProteinID:
XP_050929375
UniProt:
A0AAJ8BAD0
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Position
LG10:14153696..14162086
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AA seq
891 aa
AA seq
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MALTELKWTMCQAKDLVCSLVVLLCLHTATGMSGWGGCLDGQDVFATVRENSLSGEVVAE
LMADTTIEGIHWGLDGKDADWFFLDERHIRLNTSADKVLDREAQGPLLMAELSCYEEDIF
QSVYRIVVEILNENDNSPMFSENTAQSLVISELTPVNTVVFTVQATDADNDKIIYSIDQT
SPDAEYFRFDLPNSGEVILSKPLDYETKTVLTVTIHASEMSTAERFNTSTNITITVLDGD
DQYPQFLPCTLLFQDEISRICTSPVYTVNVTEGEEDIVLDFSPGPIHAVDGDTGLSSPLS
YAILSGDDDGYFLMDRETAEVKLIQGVRDRLTTPLLHLQVMAYQDDDPRKYSVATVLVRV
LAVNHFYPEFDMAEYHGFVTAGKSPASLVNTYGSKALMLHVQDQDFNNSFNPMIHFTFSP
TSNYTDIYQLTQEGLLIAKTNQLKPKQKHILEVTATDLESGDATFTTVVIEVLSEGQSIP
QSPLGDDRLTGCTVGKALFLSMVFMTLLGCILSMVMWLKKKHKGKRDPLQRGCVAQGKHP
NVSLRWFQLVSHRSAMPHMDEVPFNNEEYGTCNPSFSFLDNPGIYTHQDLPSCRGPVPPR
ATAAPDTSFIPTESVCSPVILNNNVSMSTKSSSSSPTFHPATVDVNPTHMASDAAPSKEN
LDLPLATSLDPIEVLPNTSPSPATPDAPCTPPYTCPNSQTIQTTTDDDPADPVTSPSSQA
SIPCSNTRIASAEIDKPFRKSRVKTPPYSPLLSSALPKQMSTPPSTPEHAPLKAKLVHID
TSPLDTPPVTPARTTETLSTEEDQPSTSLDHTDQSEHPGADADSPFQERRPSANSGNSQD
GRRAGDEEDDGFLGDEDADKNSEGEGELEPDEEELLRVIARCNPIFLTFSK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggccctcactgaactgaaatggactatgtgtcaggccaaggatctagtctgctcactg
gtggtcctcctgtgtctgcacacagccacaggaatgtcagggtggggtggatgtttggac
ggtcaggatgtatttgcaacagtcagagaaaacagcctctcgggagaagttgtcgctgag
cttatggctgacaccacaattgagggcatacactggggcctggatggaaaggatgctgat
tggttcttcttggatgaaagacacatccggctgaacacatcagctgacaaggtcctcgac
cgagaggcacagggtcccctcctcatggcggagttgtcatgttatgaggaggacatattt
cagagtgtgtacaggattgtggtggagattcttaatgagaatgataactcacccatgttt
tcagaaaacactgctcagtctcttgttattagtgagcttactccagtgaatactgtggtc
tttactgtccaggccacagatgcagataacgacaagatcatttactctattgaccagaca
tcacctgatgcagagtacttcaggtttgatctcccgaacagtggagaggtgatcctatcc
aagcctctagactatgagaccaaaactgtgctcactgtcaccatccatgcctcggaaatg
agcactgctgagcgtttcaacaccagcaccaacatcactatcaccgttttggatggggat
gaccagtacccacagttcctgccctgcacgctgctcttccaagacgagatcagtcgcatc
tgcaccagccccgtgtacacggtcaatgtcacagagggagaagaggacattgtgctggac
ttctctcctggtcccattcatgcagtggatggagacacaggactcagctctccactcagt
tatgccattctctcaggggatgatgatggctatttcctgatggacagagagacagcggag
gtgaaactgattcagggagtgagagacagactcacaactccattgctgcatcttcaggtc
atggcataccaggatgatgaccccaggaagtactctgttgctacagtcttggtccgagtc
ctggcagtgaaccatttttatccagagtttgacatggctgaatatcatggttttgtaact
gctggaaagagccctgcctctctggtcaatacctatggcagcaaagcactgatgctacat
gtacaagaccaggactttaacaatagtttcaacccaatgatccacttcaccttcagtcct
acatccaattacacagacatctaccaactcacacaggagggtcttctgatcgccaaaacc
aatcaactcaaaccgaagcagaaacacattctagaggtaacagctacagacctggagtca
ggtgatgccacctttactactgtagtgatcgaggtgttgtctgaaggacagtcaatccct
caaagtccactgggagatgaccgcctgacaggctgtactgtgggcaaagcgttgtttctc
agcatggtatttatgactctgctgggatgtatcttgtctatggtgatgtggctgaagaaa
aaacacaagggaaagcgcgacccactgcagagaggttgtgtggcccagggcaaacacccc
aacgtgagcttacggtggttccaactggtgagtcaccgcagtgccatgccgcacatggat
gaagtaccctttaacaatgaagaatatggaacctgtaatccttccttcagcttccttgac
aaccccggtatctacactcaccaagacctcccctcctgccgaggacctgtcccacccaga
gcgaccgctgcacctgacaccagtttcatcccgactgaaagtgtgtgcagccctgttatc
ctcaataacaatgtttctatgtcaaccaaaagctcctctagttcacccacctttcaccca
gccactgtggatgtgaaccccacacacatggcttcagatgctgcgccatccaaagaaaac
cttgacttaccacttgctacatccctggaccctattgaggtactacctaacaccagtcct
agccctgcaacccctgatgccccttgcacccctccttacacctgtcccaattcacaaact
atccaaacaaccactgatgatgaccctgctgaccccgtcacaagcccctcctcacaggct
agcattccctgcagcaacacccgaattgcttcagcagaaatagacaaacccttccgcaaa
tctcgtgtgaaaacacccccatattcacctttattgtcctcagccctccccaagcagatg
agcacacccccatccaccccagagcacgcacctttaaaagccaagctggtacatatagat
acgtcaccccttgacacacctccagtgacaccagcgcgaacaactgagactctaagcaca
gaagaagaccaaccctccacatcactggaccatacagaccaatcagaacacccaggcgca
gatgctgatagtccatttcaggagagaaggccttctgcaaactcaggaaacagccaggac
ggccgcagggcgggggatgaggaagacgatggttttctgggagatgaagatgcagacaag
aacagtgagggtgagggtgagttagagccagatgaagaagagctactgagagtgattgct
cgttgtaatcccatttttcttacatttagtaagtga
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