Lates calcarifer (barramundi perch): 108875155
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Entry
108875155 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte growth factor
KO
K05460
hepatocyte growth factor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108875155
04020 Calcium signaling pathway
108875155
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108875155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108875155
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108875155
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108875155
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108875155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
Motif
Other DBs
NCBI-GeneID:
108875155
NCBI-ProteinID:
XP_018519397
UniProt:
A0AAJ7LDH3
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Position
LG10:14603655..14622529
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AA seq
713 aa
AA seq
DB search
MWIYKLIIGLIVISCSEGKRNALQDYQRTDGTRLVAVSPDFSYPTKSRKLSMARCAKSCS
RNRRLPFTCRAFLYDHKNRKCQWLSFDRNSPGAQSQQDFNYQLYQKKDYVRECIVGTGQS
YRGRRSVTVSGILCQAWASPIPHEHKFMSKRFRKKDLRENYCRNPDNSTVGPWCFTTDPR
PHLRHQECGIPQCSQVECMHCNGEDYRGPMDHTESGKECQRWDLDEPHKHLYHPKRYSGK
GLDDNYCRNPDGRHRPWCFTADPNTPWEYCNIKVCETPPKSNVVETTECYQGRGEGYRGT
VDVTPTGLTCQRWDSQYPHNHSFLPQAYPCKDLRENYCRNPDGQESPWCFTTDPRVRTML
CTNIPQCGTQNKPVTDCYEGFGENYQGEQSRTRSNLPCTPWTDHSNSGERGMLTAGLEGS
YCRNPDKDKHGPWCYTNNSAIPWDYCTVKPCDASQNTIPLGELSSVGCFVHKRTRIVGGG
PVSISEGSWMVSIQKGSLHWCGGSLIREEWVLTDRQCFSSCVPDLSEYQVWLGVSDIGEG
APDWSKRQEVSIAHVICGPEGSSLALIRLSKPALPADNVHTIQLPVAGCSIPEGTICKMY
GWGETKGTGHDDVLKAVNLPIVSNERCREMHRGNFHISNTKICAGGKRNEGVCERDYGGP
LVCQDGEIRVIVGVSVHGRGCARANQPGIFINVPFYTQWIYKVFKHYPNPETV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtggatttacaagctcattatcggactcatcgtcatttcttgttctgagggtaaacga
aatgcgctccaggactatcagaggaccgatggcacccggctggttgccgtgtctccggat
ttctcctacccgaccaaaagcaggaagctgagcatggccaggtgcgccaaatcctgcagc
cgcaacagaaggctccccttcacctgcagagcgttcctctatgatcataaaaacaggaaa
tgccagtggctgtcattcgacaggaactcaccaggagctcagagccagcaggacttcaac
taccaactctatcaaaagaaagactatgtcagagagtgcattgtgggtacaggtcagagc
tacagggggcggaggtcggtgacagtgagtgggatcctgtgccaggcctgggcctctccc
attcctcatgaacacaaattcatgtctaagaggttcaggaaaaaggacctcagagaaaac
tactgtcgcaacccagacaactccaccgttggcccgtggtgctttaccactgaccccagg
ccacacctcagacaccaggagtgtggcataccacagtgttcacaggtggagtgtatgcac
tgtaatggggaagattacagaggacccatggaccacacagagagtggaaaggaatgccag
cgctgggacctggatgaaccccacaaacacctgtaccaccccaagaggtactctggcaaa
ggcctggatgataactactgtaggaacccagatggacgccacagaccctggtgctttaca
gcagatccaaacacaccctgggagtactgcaacatcaaagtttgtgaaacacctcccaaa
agtaatgtggtggaaacaaccgagtgttatcagggcagaggagaaggttacagggggacg
gtggatgtgacgcccactggactcacatgccaacgctgggactctcagtatccccataac
cactcattcttacctcaggcctacccctgcaaggacctgagagaaaactactgtcggaat
ccagatggccaagaatccccctggtgcttcactacagaccctagagtccgcacaatgctc
tgcaccaacatccctcagtgcggcacccaaaacaagcctgtcactgactgctatgaaggc
tttggagagaattaccaaggagagcagtcgaggactagatcaaaccttccctgcactccc
tggactgaccacagcaacagtggtgagaggggcatgctgacggctggcctggagggaagc
tactgcagaaatcctgataaagacaaacacggtccctggtgttataccaacaactctgcc
ataccctgggactactgcactgtaaaaccatgtgatgcttcacagaacaccattccactg
ggtgagctgtcctctgtggggtgttttgtccataagagaaccaggattgtgggaggaggt
ccagtgagcatatcagagggcagctggatggtcagcatacagaaagggtcgctgcactgg
tgtggaggttcgctaatacgggaggagtgggtactcactgacagacagtgcttctcctca
tgtgttccagacctcagtgagtatcaggtgtggctgggagtctctgatattggagagggt
gctcctgactggtccaagagacaggaagtcagcatagctcatgtgatatgtggccctgag
ggctctagtttagccctcatacgactgtccaagcctgcccttcctgcagacaacgtccat
acgattcagctgcctgtggctgggtgctccatcccagaaggaacaatatgcaaaatgtat
ggatggggcgaaaccaaaggcactggccatgacgacgtgctaaaggccgttaacctgccc
attgtcagtaacgagaggtgcagagagatgcacagagggaacttccacatcagcaacacc
aagatctgtgcaggaggcaagaggaatgagggagtgtgtgagagggattacggcggccct
ctcgtgtgtcaggacggcgagatcagggttattgtcggagtgagtgtccatggcagaggc
tgcgctcgggccaaccagccaggcatcttcatcaatgtgcccttttacacgcagtggatc
tacaaggtcttcaaacattatccgaaccctgagactgtttag
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