Lates calcarifer (barramundi perch): 108875225
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Entry
108875225 CDS
T04895
Name
(RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit beta isoform
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04110
Cell cycle
lcf04114
Oocyte meiosis
lcf04136
Autophagy - other
lcf04140
Autophagy - animal
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04350
TGF-beta signaling pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108875225
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108875225
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108875225
04136 Autophagy - other
108875225
09143 Cell growth and death
04110 Cell cycle
108875225
04114 Oocyte meiosis
108875225
09144 Cellular community - eukaryotes
04530 Tight junction
108875225
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108875225
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108875225
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108875225
04131 Membrane trafficking [BR:
lcf04131
]
108875225
03036 Chromosome and associated proteins [BR:
lcf03036
]
108875225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108875225
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108875225
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
108875225
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108875225
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108875225
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108875225
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108875225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Glyco_hydro_65N
zf-TAZ
Motif
Other DBs
NCBI-GeneID:
108875225
NCBI-ProteinID:
XP_018519500
UniProt:
A0A4W6DWW9
LinkDB
All DBs
Position
LG13:26874400..26883695
Genome browser
AA seq
309 aa
AA seq
DB search
MEDKSFTKELDQWIEQLNECKQLTENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHG
QFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVTLKVRFQERITILRGNHES
RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
HQLVMEGYNWGHDKNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
TRRTPDYFL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaatcttttactaaagaattagaccaatggatcgaacagctaaacgagtgt
aagcagctaacggaaaaccaagtcaggacactctgcgagaaggccaaggagattctgacc
aaggagtccaacgttcaggaggtgcgatgcccggtgacggtgtgcggcgacgtccacggt
cagttccacgacctgatggagctgtttaagatcggaggaaagtctcccgacaccaactac
ctgttcatgggagactacgtcgacagaggctactactccgtggagacggtcacgctgctc
gtcacgttaaaggttcgtttccaggagcgaatcaccatcctgcgagggaaccacgagtcg
cggcagatcactcaggtctacggcttctacgacgagtgcctgaggaagtacggcaacgcc
aacgtctggaagtacttcacagacctgttcgactacctgccgctcaccgcgctggtcgat
ggacagatcttctgtctccacggaggtctgtctccctccatagacactctggatcacata
cgagctctggaccgcctgcaagaagtcccacatgagggcccaatgtgcgacctgctgtgg
tcggaccctgatgaccgcggtgggtgggggatctccccccgaggtgccggctacaccttc
ggacaggacatctctgaaaccttcaaccacgccaacggcctcaccctggtgtcccgtgcc
catcagctggtcatggagggctacaactggggccatgataagaacgtggtgaccatcttt
agtgctccaaactactgctaccgctgtggaaaccaggcagccatcatggaactggacgac
actctgaaatactctttccttcagtttgaccccgcccctcgccgcggcgagccccacgtg
accagacgcactcctgactacttcctgtga
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