Lates calcarifer (barramundi perch): 108875288
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Entry
108875288 CDS
T04895
Name
(RefSeq) protein SPT2 homolog
KO
K15193
protein SPT2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108875288
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108875288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPT2
SPT2_N
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
108875288
NCBI-ProteinID:
XP_018519614
UniProt:
A0A4W6EHA9
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Position
LG10:18001013..18006039
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AA seq
723 aa
AA seq
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MMDFDNILDIASQNQGLSNVQKRYSLQAGPPKKDPKSKGVNPAAVQALLRKQHTETKKKE
LQLKKKKEELIAKRVELKSDRKARAMASRTKDNFRGYNGIPVVDVPKKRRSKHDMQNNMS
MDGQGFRNDSVDPDDEDNYEYEQTDSEPEPEPEPLRPGKATGFSGSSSSGSKPSSKKTSG
APKPAPPTMNFADLLKLAEKKQYEPVDLKPKVVRKEERLRTADEIRELEMERKAKRQDKD
KDSKTERERDSKSQSSSSSIKKNTLEKEQKNCKPQKNSLEKPSLPSGSGKKSHGDRGHSS
SKPSGGDRERERPKMSHSDRDRSKTILPSSSGAINSKVPSKATSSQVSAKQGPPRPSSSH
KSSTSSDLSNKKESLSILQGRASGIPGTRPPGTSVTGQKSQHGSSQQTRPSQGSSVKQGS
VVGGHKSGKGEPLRPGINSAVKSSGNSVMRNSLGGPPKAGSQPQPRPGGTLQAKAGGVAQ
SRPGGSGLQGHPGGSGFRPQGTGPGRPGSGGPVPGRSAGSIGSGPGRPKCTVVSETISSK
NVGGPRPGVPPRPGMPQRPGMVPRPGMPQRPGMPQRPGMPQRPGMPPRPGMPPRPGMPPR
PGMPARPMMNRPPGTMLPPITSAYKRKYEDEEDEYDSEMDDFIDDGGDEQEEISRHIKEI
FGYDRAKYKDESDYALKFMESSWRDLQKEEARSLRMAVQEDLEEEKREQEELKRKCAKKR
KNN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttgataacatattggacatcgcctcgcaaaaccagggcctcagcaatgta
cagaagagatacagtttacaagctggaccacccaaaaaggacccaaagtcaaaaggtgta
aatcctgctgctgtgcaggcacttctgaggaagcaacacactgagaccaaaaagaaagaa
ctgcaattgaagaaaaagaaggaagaactaatcgccaaaagggttgagctgaagtcggac
cgtaaagcacgagccatggcctccagaaccaaggacaatttcagaggctataacggcatc
ccagtggtagacgttcctaagaagaggagatcaaaacatgatatgcagaacaatatgtca
atggatggtcaaggatttaggaatgactcagttgacccagacgacgaggataattatgag
tatgaacagacggattcagaaccagagcctgagccagagccgctgagaccagggaaggcc
acaggttttagtgggagtagtagtagtggtagcaagccctcctctaaaaaaaccagtggg
gcacccaagcctgctccacctaccatgaactttgcagacttactcaaattggcagagaag
aagcaatatgaaccagttgatctaaaacccaaggtggtaagaaaggaagaaaggctccgc
acagctgatgagataagggaactggaaatggaacgtaaggctaagagacaggacaaggac
aaagattcaaagacagagagagaaagagatagtaagtctcaatctagctctagttcaatt
aaaaaaaacactttagagaaggagcagaagaactgcaaaccacaaaaaaactccttagaa
aaaccaagtctgccgagtgggtcagggaagaagtcgcatggtgatagaggccactcttct
tccaagccctctggtggtgacagggagagagagagacccaagatgtctcacagtgacaga
gacagatccaagactattttgcctagttcatctggtgccataaacagtaaagttccttcg
aaagccacatcttctcaggtttcagccaaacaagggccccccaggccctcatctagccac
aaatccagcacctcaagtgaccttagcaacaaaaaagaaagcttatcaatacttcaagga
agagcttcaggtattcctgggaccagacctccaggtacaagtgtaacaggccaaaaatct
caacatgggagctctcaacagaccaggcccagtcagggtagttctgtgaaacagggttct
gtagttgggggccacaagtcgggaaaaggagaaccactaaggcctggaattaattctgca
gtaaaatcaagtggtaattcagtaatgagaaattcattaggcggccctcctaaggcaggg
agccaacctcagccaaggcctggaggcacactccaggcaaaagctggtggtgttgcacag
tccaggcctggtggaagtggtctacaaggtcaccctggaggtagtggattccgtcctcaa
gggactggacctggtcggcctggtagtgggggcccagttccaggacgatcagcaggcagc
atcggatcaggacctggaagacccaagtgtactgtggtgtcagagaccatctcatccaag
aatgttggtggacccagaccaggagtccctcctcggccaggcatgccacagagacctggg
atggtacctagaccgggaatgccacaaagaccgggaatgccacaaagaccgggaatgcca
caaagaccgggaatgccacccagacctggaatgccacccagaccaggaatgccacccagg
ccgggaatgccagctagacctatgatgaacaggccaccgggtacaatgttaccgcctatc
acatctgcctacaagaggaaatatgaagatgaggaagatgagtatgactcagaaatggac
gattttattgatgacggaggtgatgagcaagaggaaatttccaggcacattaaggaaatc
tttggctatgatcgagccaaatacaaggatgagagtgactatgcactaaaattcatggag
agcagctggagagatctgcagaaagaagaagccaggagcctgagaatggctgtgcaagaa
gatctggaggaggagaaaagagagcaagaggagctgaaaaggaaatgtgccaagaagaga
aaaaataactga
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