Lates calcarifer (barramundi perch): 108875308
Help
Entry
108875308 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108875308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108875308
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108875308
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108875308
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
108875308
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
108875308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
108875308
NCBI-ProteinID:
XP_018519643
UniProt:
A0AAJ7LC78
LinkDB
All DBs
Position
LG10:complement(16463407..16471298)
Genome browser
AA seq
1198 aa
AA seq
DB search
MLHVLRSPLQRSLISLQWTCLRSLFSTKPHSLQGEDSTETRLNPLKIQMLSKNLHKQIFR
GVEPQYREEEVERSINHLQKQKLWGKETSLLPDVELKLPKMYGKNIDEHFRTLARIQSLP
YLEAATKLHLAELPPMPQEWKWEVGWTRYGPNGESQKVDFPEESALVFDVEVCMSEGQCP
TLAVAVSPTNWYSWCSKRLIEERYSWSNQLTLADLIPLETLINSAKTPRGQWNHRLIVGH
NVSFDRSYIKEQYLLKGSMVRFMDTMSLHMAISGLTGFQRTLWMASKLGKKRGLQEVKEH
IKKTGQKGEGSMIGSWDWVNISSINNLADVHALYVGGPPLQKEARDTFVKGSMMDVRNNF
QELMQYCAMDVQATHEVFSEQLPLFMERCPHPVTFAGMLEMGVSYLPVNQNWGRYLEDSQ
DIYEELQREMKKSLMTLADDACQLLQDDRYKEDPWLWDLEWDVQEFKLKKVAASKKKQLK
KAVETQAATPLPDLDEDPGPPSEEEMAGPCPSRLAVEKLKETVNQLPKRRQHLPGHPGWY
RKLCEKMSDEDSWSPGANQISLQMRLTPKLMGLTWDGFPLHYTEKHGWGYLVPGRRDNLN
SQEENTGPVCPHRAIENVYREYCEQNSKEQPEYLDSNLSDDLMLTDSAVWTKVEELSSLE
SLTEENGVRMMNNGGKKKNMSQEPHNVPEKSQCHYHHGNGPYNDVDIPGCWFFKLPHKDG
NHNNVGSPFSKDFLAKMEDGTLRAGRGGTNATRALEINKMISFWRNAHKRISSQMVLWLR
KGELPRFVSRHKEFDEEGQYGAILPQVITAGTVTRRAVEPTWLTASNARRDRVGSELKAM
VQVPPGYHLVGADVDSQELWIAAMLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTAE
TVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLSQTEAASKAKKMYALTKGIRRYNL
SENGEWLVSELGIEVEREENGSVSLQELRKISRLASKCSKRKGWDIVGKRVWTGGTESDM
FNKLESIAHSAQPATPVLGCRISRALEPKAVKNEFITSRVNWVVQSSAVDYLHLMLVAMK
WLFEENDIDGRFCISIHDEVRYLVRSEDRYRAALALQITNLLTRSAFAHALGMQDLPQSV
AFFSAVDIDQCLRKEVNMDCVTPSNPTGLERRYGLPPGEALDIYQIIDITKGSLMKQR
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatgttttgcgcagtcctctgcagaggtctctcatctctctacaatggacatgt
ctacgctccctgttctccaccaagcctcattcccttcagggcgaggactctacagagacc
cgcctgaatcccctcaaaattcagatgctctcaaagaacctccataagcaaatctttcga
ggggtggaaccacaatacagagaggaagaagtggagcgcagcattaaccatttgcagaaa
caaaaactgtgggggaaggaaacttcactattgcccgacgtggagctgaaacttcccaaa
atgtatgggaaaaatattgatgagcacttccgtaccttggcaaggattcagagccttccc
taccttgaggctgccaccaagctgcatctggccgagctccctcccatgccacaggagtgg
aagtgggaggttggctggacacgctatgggcccaacggggagagtcagaaggtggatttc
ccagaggagtcagcactggtgtttgatgtggaggtgtgcatgtcagagggacagtgtccc
acactggctgttgctgtgtctcccactaactggtattcctggtgtagcaagcgtctgatt
gaggagcggtattcctggtcaaaccagctgacccttgctgacctcatcccacttgagaca
cttatcaattctgccaaaactcccaggggccagtggaatcacaggcttatagtgggccat
aatgtcagttttgaccgatcttacataaaggagcagtacttactgaagggttcaatggta
cgattcatggacacaatgagccttcacatggccatctcaggactgactgggttccagcgc
acactgtggatggcgagtaagctgggcaagaaaaggggtcttcaggaggtcaaggaacac
atcaagaaaactggacagaaaggggagggatcgatgatcggctcctgggactgggtgaat
atcagcagcattaataacctcgctgacgtccatgcactgtatgtgggagggccgccactg
cagaaagaggccagagatacctttgtgaagggcagcatgatggatgtcaggaacaacttc
caggagttaatgcagtattgcgccatggatgttcaggccacgcatgaagtcttttcagaa
cagttgcccctcttcatggagaggtgtcctcatccagtgacgtttgcggggatgctggag
atgggcgtgagctaccttcccgtcaatcaaaactggggtcggtacctggaagattcgcag
gacatttacgaagagctccagagagagatgaagaagtctctgatgactctagcagatgat
gcctgccagctgctgcaggatgacagatacaaagaagacccctggctttgggatctggag
tgggatgtacaggaattcaagctgaagaaagtagcagctagcaagaagaaacagttgaaa
aaagcagttgaaacacaagctgctactcctcttccagacttggatgaagatccagggcca
ccatctgaggaggagatggcaggcccgtgccccagcaggttggctgtggagaagctgaag
gaaacagtgaatcaacttcctaaacgaaggcaacatctgcctggacatccagggtggtat
cggaagctgtgcgagaagatgtctgatgaggacagctggtcacctggcgcgaaccagatc
agtctgcagatgagactgacgcctaagctgatgggtctgacgtgggatggtttccccctg
cattacacagagaaacatgggtggggctatctggtacctggacgcagggataatttaaat
tctcaggaggaaaacactgggcctgtgtgcccacacagagctattgagaatgtttacaga
gagtattgcgagcagaacagcaaagagcagcctgaatatctggactccaacctctcagat
gacctcatgctgacagacagtgcagtgtggacaaaggtggaggagttaagttccttagaa
agtttgactgaggaaaatggagtcagaatgatgaacaatggggggaaaaagaagaacatg
tcccaagagccacataatgtcccagagaagagtcagtgccactatcaccatggaaatggg
ccttacaatgatgtagatatcccagggtgctggtttttcaaattacctcacaaggatggt
aatcacaacaatgttggcagtcctttttcaaaggactttctggccaagatggaggatggt
actcttagggctggacgaggtggaaccaacgctacaagagctctggagatcaacaaaatg
atttccttctggaggaatgcccataaacgtataagctctcagatggtgctgtggctgcga
aaaggagagcttcctcgatttgtcagcagacacaaagagtttgatgaagagggtcagtac
ggtgccatattacctcaggtcatcaccgctggaacagtaactcgcagggctgtggagcca
acgtggctgactgccagtaatgcacggcgggatcgggtaggcagtgagctgaaggccatg
gtgcaggtaccacctgggtaccacttggttggagcagatgtggactctcaggagttgtgg
attgctgctatgctcggagaggctcactttgctggcatgcatggttgcacagcttttggc
tggatgaccctccagggaaagaagagtcagggcactgacctgcacagccgcactgctgag
actgtgggtatcagcagagagcatgcaaaggtgttcaactatggacgcatctatggtgct
ggacagccttttgccgagaggctgctgatgcagttcaaccaccgactcagtcagactgaa
gccgccagtaaggccaagaagatgtatgccctaacaaagggtatacgcagatacaatctg
tcagagaacggtgagtggctggtcagtgaactgggcatagaggtggagagggaagaaaat
ggaagtgtgtccctgcaggagttgcgcaagatttctagactggcctcaaagtgttctaag
cggaaggggtgggatattgttggcaaacgtgtgtggactggaggcactgaatcagacatg
ttcaacaagctggagagtatagctcactcagcccagccagcaactcccgtcctaggctgc
aggattagcagagcactggagcccaaggcagttaagaatgagtttattaccagcagagtg
aactgggtggtgcagagctcagcagtggactacttacatctgatgctggtggccatgaag
tggctctttgaggagaacgacatcgatggccgtttctgcatcagcatccacgatgaggtg
cggtacctcgtccgcagtgaagaccgttacagagcagcgctggcacttcagatcacaaac
ctgctcacgaggagtgcattcgcccacgcattaggcatgcaggaccttccgcagtcagta
gctttcttcagtgcagttgacattgaccagtgtctgaggaaggaggtcaatatggactgt
gtgacaccctcaaatcccacaggtctggaacgaagatacggactaccacctggtgaagcc
ttggacatctaccaaatcatcgacatcaccaaaggttctctgatgaaacaaagatag
DBGET
integrated database retrieval system
