Lates calcarifer (barramundi perch): 108875315
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Entry
108875315 CDS
T04895
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00071
Fatty acid degradation
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04148
Efferocytosis
lcf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108875315 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108875315 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108875315 (cpt1b)
03320 PPAR signaling pathway
108875315 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108875315 (cpt1b)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
108875315 (cpt1b)
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108875315 (cpt1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
108875315
NCBI-ProteinID:
XP_018519649
UniProt:
A0AAJ7LEC0
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Position
LG10:15225257..15233903
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AA seq
785 aa
AA seq
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MAEAHQAVGFQFTVRPDGVDFKLSQEVIKNIYLSGVTAWKKRAIQFKNGVLAGVYPASPS
SWLIVVIAMMSSLYIRIDPSLGMIDAIKDNLPQREHVSVQTRVVLSAILFATGLWLFLIY
LLRYTLKVLLSYHGWIFESHGKMSTSTKVWLSLVKMFSGRRPLLYSFQASLPRLPVPSVD
DTIHRYLESVRPLLDNDQYNQMEILANDFRDFKAAQLQRYLILKSWWATNYVSDWWEEYI
YLRGRSPIMVNSNFYIMDLLYMTPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRALGTV
PMCSTQMERMFNTTRIPGIETDIVQHLTDRKHLVVYHKGRFFQVWLYTGGRHLLPSELET
QFQRILNDTSEPQPGELKLAALTAGNRVPWARARIKYFSQGVNKVSLDAIESAAFFLTLD
DEPQGYDPAKTNSLDSYAKSLLHGKCYNRWFDKSFTLISYPNGKIGINAEHSWADAPIVG
HMWEYVLATDCFHLGYTEEGHCKGDVNKGLPLPTRLQWQIPKECQEVIETSYLSAKQIAD
DVDFHGYLFTDFGKGLIKKCRTSPDAFIQLALQLAQFRDQGVFCLTYESSMTRMFRDGRT
ETVRSCTSEAVAFVRAMEDADATNAQRLALFRKAADKHQNMYRLAMTGSGIDRHLFCLYI
VSKYLGVDSPFLKKVLSEPWKLSTSQTPQQQLNLVDINKFPKYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISCKFSCPNTDSYRFGQNIQKAMLDIQGLFKPENDEKVVERRKHIEN
GKKHI
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcacatcaggcggtgggcttccagttcactgtgcgccctgatggtgtggac
tttaaactcagtcaagaggtcatcaaaaacatctacctgtcaggagtgacagcatggaag
aagagagccatacagttcaagaatggtgtattagctggagtctatccagccagtccatcc
agctggctgatagttgtgattgccatgatgagttcgttgtatatccgcatagacccctct
ctaggaatgattgatgccatcaaggataacctaccacaaagagaacatgtgtcagtgcag
acccgagtggtgctgagtgccatcctctttgctactggactgtggctgttcctcatctac
cttttgagatacactctcaaagttctgctctcctaccatggctggattttcgaatcccac
ggaaaaatgagcacatctaccaaagtgtggctgagcctggtgaagatgttctctggacgc
agaccactgctttacagtttccaggcctctttacccaggctccctgtgcccagtgtggat
gatacaatccacaggtaccttgagtcagttcgtcctctgctggacaatgaccagtacaac
caaatggagattttggccaatgactttagagatttcaaagcagcccagctgcagagatac
ttaatcctaaaatcctggtgggcaacgaattatgtaagtgactggtgggaggagtatatc
tacctcaggggcaggagtcctatcatggtaaacagtaacttctatataatggacctcttg
tatatgaccccaacacaccgacaggctgcacgagcagggaacgtggtccatgccatgctg
cagtacagacgcaaactggaacgtggtgaacatgcaccgctgagggctttggggaccgtt
cctatgtgttccactcagatggagagaatgtttaacaccacccgcatccctggcattgaa
acagatattgtgcagcatctgactgaccgtaagcacctggttgtctaccacaagggccgc
ttcttccaagtatggttatacactggagggcgccacctcttacccagtgaacttgagaca
cagtttcaaaggattcttaatgatacatcagaacctcagccaggagaactcaaattagct
gccctgacagcaggaaacagagttccctgggctcgggctcggattaaatatttcagtcag
ggagtgaacaaagtgtccctggatgccattgagtcagctgccttcttcctgacactggat
gacgagccgcaaggttatgaccctgcaaagactaattcactcgatagttatgctaagtcc
ctgctgcatggaaaatgttacaacaggtggtttgacaagtctttcaccctgatctcgtat
ccaaatggaaaaattggtataaatgctgaacattcttgggctgatgcaccaattgtagga
catatgtgggagtatgtccttgcaacagactgcttccatcttggctacacagaggaagga
cactgtaaaggggatgtgaacaagggccttcctcttcccactcgactacagtggcagatt
ccaaaggagtgtcaagaagtcatcgagacctcatacctatcagccaagcagatagctgat
gatgtggactttcatggttacctgtttactgattttgggaaaggcctgatcaagaagtgc
cggaccagccctgacgcctttattcagctggccctgcagttggcgcagttcagggatcag
ggagtgttttgtctgacgtacgagtcatcaatgacccgtatgttcagagacggtcggaca
gaaacagtacgctcctgcacctctgaggcagttgcatttgtcagagccatggaggatgca
gatgcaacaaatgcccagagacttgccctgtttcggaaggcagcagataagcatcaaaac
atgtatcgtctggccatgactggttctggtattgaccgtcacctcttctgtctctacata
gtgtccaagtaccttggtgttgactcaccatttcttaagaaggtgctgtcagagccctgg
aagttgtctaccagccagaccccacagcagcagctcaatttagttgacatcaataagttc
cctaaatatgttggtgctggtggtggatttggcccagtggctgatgatggttatggtgtg
tcttatatcattgttggggaaaacctcatcacattccacatctcctgcaagttctcttgc
cccaacacagactcataccggtttggtcagaacattcagaaggccatgcttgacatccaa
ggacttttcaagcctgaaaatgatgagaaagtggtggagcgtagaaagcacatagaaaat
gggaaaaagcacatataa
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