KEGG   Lates calcarifer (barramundi perch): 108875342
Entry
108875342         CDS       T04895                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108875342
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108875342
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108875342
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108875342
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108875342
    Little elongation complex (LEC)
     108875342
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 108875342
NCBI-ProteinID: XP_018519704
UniProt: A0A4W6CE57
LinkDB
Position
LG10:12925060..12949457
AA seq 599 aa
MAALRQEHRYGLSCGKINKNTPNQTLYHVKLTDTAIRTLEAYQNLKASLSNQPAICFKGS
QGYIKIPAPTPESPDGFRVFSFYLSSDSKDKPQSSFDCIHQYVSGEGRDHLEGQGSIQDK
ITVCATDDSYQTTRERMSQVEKDIWSRSAIEIKPGPSKCVKVQRKQGLVSGSESSNKHSP
SNKRSLVPSPVAHRPLRDRIIHLLALKPYRKPELLLWLERERASPKDKTDLTSVLDEVGK
LNPKDHSYSLKDELYRHVQRDWPGYLEEEKQLIHRLLIRKLQSLHSSQLKSPQSNHSFHK
TPGDSPSQLSPAKNLSVKRPLPSDPSSCQTPKKQRPLDQCLPLHSPSHGDYGTNGAHSSS
GHGNSNVHIKIEVDKTNNHLQGSPNGLYSPHKLSGSSAIPKLERTEPTPTAPSPKLPHSN
TSICTDQQFTNSQHKKKRSKKHKDKERERLKADWIETSPDLKQNQENLKDHEGEKTPVNR
TSAEELPDYLIKYSTIKALEQRQQYKDDFCAEYDEYRALHDRIGAITEMFVQLGSKINTL
SPGTQEYKLMEDQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLITDYDRAQELS
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtggcaaaatcaacaaaaac
accccgaatcaaactctttatcacgtaaaactcactgacactgccatccggaccttggaa
gcctaccagaacctgaaggcgtcactatcaaatcagccagcgatttgcttcaaggggagc
caggggtacataaagatcccagcgccaacccctgaatctcctgatggattcagagtcttc
tccttctacctatccagcgacagcaaagacaaacctcagtccagcttcgactgcattcac
cagtatgtctcaggggagggcagggatcacctggagggccagggcagcattcaggacaag
atcacagtttgtgccacagacgattcctaccagacaaccagggagcgcatgtcgcaggta
gagaaggacatctggagccgctcagcgattgagatcaagccggggccaagtaagtgcgtg
aaggtccagaggaagcagggtctggtatcaggctcagaaagcagcaacaagcactccccc
agcaacaagaggagcctggtccccagccctgtagcacaccggcccttaagagatcgcatc
attcatctcctggccttaaagccctacaggaaacctgagctgctactgtggttggagagg
gagcgagccagtccaaaggacaagactgacctgacctcagtactagatgaggttggtaaa
ctgaaccctaaagaccacagctactctctgaaggatgagctctacagacacgtccagcga
gactggcctggatacctagaagaagaaaagcaactcatccataggctcctgatcaggaaa
cttcagtcactccacagtagccagttgaagagtccccagtccaaccattcattccacaaa
actcctggggactctccttcgcaactcagtcctgccaagaatctctctgtgaaacgccca
ttgccctctgacccatccagctgtcaaacccccaaaaaacaaagaccattagaccagtgt
ttgcctctgcattcgccttctcatggagactacggcaccaatggggctcatagctcctct
ggtcacggaaactctaatgtgcacatcaaaatagaggttgacaaaaccaacaatcatctc
caggggagcccaaatggtctgtactcaccgcacaaactcagcgggtcgtctgctattccc
aaactggagaggacagagcccactcctactgctcccagccctaagctcccacactctaac
acctccatttgcactgaccaacagttcaccaacagccaacataaaaagaagaggtccaaa
aagcacaaagacaaggaacgagagcgcttaaaagccgactggatagagaccagtccagac
ctgaagcagaaccaagaaaatctcaaagaccatgagggagagaaaacacctgtcaatcga
acctcagcagaggaactgccagactatttaataaaatacagcaccataaaagcactggag
cagcgtcaacagtataaagacgacttctgtgccgagtacgatgaatacagagctcttcat
gaccggattggggccatcacagagatgtttgttcagttgggctcaaagatcaacactctc
tccccgggaacacaagagtataagcttatggaggaccaaatactacaaaagtaccgaaag
tataagaaaaagtttccagggtatcgggaagagaagaagcgatgcgagtacctccatcag
aagctgtcgcatataaaaggcctgatcacagattacgaccgagcacaggaactctcctag

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