Lates calcarifer (barramundi perch): 108875385
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Entry
108875385 CDS
T04895
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108875385
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
108875385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
HDA2-3
TPR_2
SWI2_SNF2
TPR_1
TPR_11
TPR_8
TPR_16
Motif
Other DBs
NCBI-GeneID:
108875385
NCBI-ProteinID:
XP_018519803
UniProt:
A0AAJ7LEJ3
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Position
LG13:27080405..27087253
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AA seq
1284 aa
AA seq
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MDVSHRDGEVAKISEKLEKSLSIDTDDNMEAYHRFIQDGKDATRQGDLHKALELFKLAYN
LHQSEKLEKKIKKIEEFLAQNESEDEDEEFVNVNNSGLMLFKELYDKLYDYQRNGVAFLY
SLYRDGRKGGILADDMGLGKTIQVISFLSGMYDNELVKHSLLVMPTSLITNWTKEFAKWT
PGMRVKEFHGTSKGERTRNLEKVQRRGGVIITTYTMLMNNWQQLSSYHGREFTWDYMILD
EAHKIKTTTTKTAKSAYAIPSKNRVLLTGTPVQNNLKEMWALFDFACQGTLLGTAKTFKT
EYENPITRAREKDATPGEKALGSRMSENLMAIIKPYFLRRTKAEVQKNKMNGTHPCKEDE
SDNKDSQVPNHQKDSGAVMPTLTRKNDLIVWTYLSAVQEDIYRQFISLDHIKELLLTTRS
PLAELTILKKLCDHPRLLSAGAIAKLGLEESTAESQESDHVDTDTHSIANVPDDTLISES
GKLVFLFALLERLRQEGHRTLVFAHYRKVLDIIERILGNRGFKVLRLDGTITQIAERERR
ITLFQTDERYSVFLLTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTENV
VIYRLITCGTVEEKIYRRQVFKDSLIRQNTGDKKNPFRYFSKQELKELFTLEDTRSSSTQ
LQLQALHSRHRRTDPELDEHIAHLHAMEMFGISDHDLMFSLDIDHDEAPEDQEHHYIEGR
VQKAQELMRAESELQMQLTENMASSTEPAWLRQPVDSRERSNEKKPRNPRLSPSYPQQDS
NSNSSLVVVELDHSDSGKEDGQQNLSNQVIDLTAGESMTEEEQPVVETIQDKLFEKSLDS
PKHQSIKQERSYLEAADSSPQETIDESLVMSEAVDAAAGDVANASVEELMNQSAMSEAAV
VSAGEGSLAYITAVDEHKHLLNGSSHSKCNDSQMDLGHPYSTPLQNKRLSILQTSNSSFK
ADASSRVSAGIESFEGNFNLQLEDSDMFSENGVQDPQEADVEERKLLSQLQINESFDVNK
SLSEWQHKEEGLRQSLNNGHASNMEELMNDSIIVTKKKRAAVIYDSDEDEGGDDNDKRQL
ENSFQVLGASTPLQSRKSFGGNTSVASRHSLLQSIIDDTDDLLGDEDEGVDDEDDSSERH
SDEAEEDNVIDSSHDEFQLEETTGETLNTEGEEEQSESPGVVDESGEEMNSFLEDSTCDT
ELASSERMDQLTVDAGVKANGTKDAIESEDENYNSLVSRGKECYSKGKVDEALSFFLRAI
DIKPGDPEIQLMVIQLYRQLSQRS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctctcaccgtgacggtgaagttgcgaagatttccgagaagctggaaaagtct
ttgtccatagatacagacgacaacatggaagcatatcacaggttcattcaagatggtaaa
gatgctaccagacaaggggacctgcacaaagcgctggagctcttcaagctggcatacaac
cttcaccagagtgaaaaacttgaaaagaagataaagaaaattgaagaatttcttgctcag
aatgaatcggaggatgaagatgaggagtttgtcaatgtaaacaacagcggtttaatgctt
tttaaagagttatatgacaagctttacgactaccagaggaatggagtggccttcttgtac
agtctctacagagatggtcgtaaaggtgggatcctggcggatgacatgggtctcggtaaa
accatccaggtaatatcattcctctctggtatgtatgacaatgagctagttaaacactca
ctattggtcatgccaacttcactcatcacaaactggaccaaggagtttgccaaatggact
cctggcatgagggtcaaggagtttcacggtaccagcaaaggagagaggaccaggaatttg
gagaaagtccagaggagaggtggtgtcatcatcaccacctacactatgctcatgaacaac
tggcagcagctgtcgtcataccatggcagagagttcacgtgggactacatgatcctggat
gaggcacacaagataaaaaccacaaccaccaaaacagccaaaagtgcatatgccatacct
tcaaagaaccgagtccttctcacaggaactccggttcagaacaacttgaaagaaatgtgg
gcgctctttgactttgcttgtcaaggcactctcctcggcaccgcgaaaacattcaaaaca
gagtatgaaaacccgatcacccgtgccagagagaaggatgccactccaggggaaaaggct
ctcggctctcggatgtctgagaatctcatggccataataaaaccctacttcctccgcagg
acaaaagcagaagtgcagaaaaacaaaatgaatggcacacatccttgcaaagaagatgaa
tcggacaataaggacagccaagtcccaaaccaccaaaaagactctggagcagtcatgccc
acactgacgagaaagaatgacctgattgtctggacttacctgagcgctgttcaggaggac
atataccggcagttcatttctctggaccacatcaaggagctgctcttaaccaccaggtca
cctctggctgaattaaccattttgaaaaaactgtgcgaccacccaagactgctctctgct
ggagccatagccaagttgggcttggaggagagtacagctgaaagccaggagagtgaccat
gtggacaccgacactcacagcatcgccaacgtacctgacgacactttaatatctgagtct
gggaaacttgtttttctgtttgcacttcttgaaaggcttagacaagaaggtcatcgcacg
ctcgtctttgcacattacaggaaggtacttgacattattgaacgcatcctgggcaacaga
ggcttcaaagtactgagactggatggcacaataacacagattgcagagagagagaggcgc
atcactctgttccagacagatgagcgttactccgtcttcctcctgactacacaggttgga
ggagttggcatcaccttgacagcagcaaacagagtagtgatctacgatcccagctggaac
ccagcaacagatgcccaggctgttgacagagcataccgcatcggccagactgaaaatgtt
gtcatctacagactgatcacctgcggcacagtggaggagaagatctacaggcggcaggtt
ttcaaagactccctcatcaggcagaataccggagacaagaagaacccgtttcgatacttc
agcaaacaggagctgaaggagctcttcaccctggaggacactcggtcctcgtccacacag
ctgcaacttcaggccctgcactccagacaccgacggacagaccctgaactggacgagcat
atcgcccacctgcacgccatggagatgtttgggatttctgaccatgacctcatgttttcc
cttgacatcgaccatgacgaggccccagaggaccaggagcatcactacatcgaaggacgg
gtccagaaggctcaggagctgatgagggctgagtctgagttgcaaatgcagctgacggag
aatatggcttcgagcacggaaccagcctggctcaggcaaccagtggacagcagggagcgg
tcgaatgagaaaaaaccaagaaatccaagactgagtccttcatatccacaacaggacagc
aactcaaacagctcactggttgtggtggagttggaccactcggattctggcaaggaggat
ggtcaacagaatttgagtaaccaagtcattgatctaactgcaggtgagagtatgacagaa
gaagaacaacctgttgtagaaacaatccaagacaagctttttgagaagagcctggattcc
ccaaaacaccagtctattaagcaggagaggagttacttggaagcagcggattcttctcct
caggagacgattgatgagtctttggtgatgtcggaggccgttgatgctgcagcaggtgat
gtggcaaatgcctccgttgaagaactaatgaaccagtcagcgatgtctgaggctgcagtt
gtttcagcaggtgaaggcagcctggcatacatcacagcagttgatgagcataaacacctg
ctaaatggaagttcacactcaaaatgcaatgactcccagatggacttgggtcacccttac
agcacaccactgcagaacaaaagactgtctatcttgcaaacatccaattcaagcttcaaa
gcagacgcatcatccagagtcagtgctggaattgaatcctttgagggaaacttcaattta
cagctggaggatagcgatatgttctcagagaacggcgttcaggatcctcaagaggccgat
gtggaagagagaaaactgctgtcgcagctgcagatcaatgagagttttgacgtgaataaa
tccctttctgagtggcaacataaagaagaaggactcagacaaagcctcaacaatggccat
gcctctaacatggaggagttaatgaatgattctatcatagtcaccaaaaagaaaagagca
gcagtgatttatgatagtgatgaagatgaaggtggtgatgataatgataagagacaactt
gaaaactccttccaggtgctcggagcctccacacctctccagtcaagaaagagctttgga
ggaaacacctctgtggcctcccgccactcgctcctccagtccatcatcgacgacacggat
gacctattgggtgatgaggatgaaggtgttgacgacgaagatgacagttcagagaggcat
tctgatgaggccgaagaggacaacgtcattgattcatctcatgatgagtttcagctggag
gagacgaccggagagactctgaacacagagggggaggaggagcagtctgagtcaccaggt
gtagtcgacgaatcaggagaggaaatgaacagcttcctcgaggattcgacctgcgacact
gagctagcctcctctgagagaatggatcagttgaccgttgacgcaggggtcaaggcgaat
gggacgaaagacgccatcgagtctgaggatgagaactacaactccctggtcagcagagga
aaagagtgctacagcaaagggaaggtggacgaggccctgagcttcttcctgagagctatc
gatatcaaaccgggagatcctgaaattcagctcatggtcatccaactgtaccggcagctg
agtcagagaagttag
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