Lates calcarifer (barramundi perch): 108875404
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Entry
108875404 CDS
T04895
Symbol
si:ch73-62b13.1
Name
(RefSeq) carbohydrate sulfotransferase 1-like
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
108875404 (si:ch73-62b13.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108875404 (si:ch73-62b13.1)
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
108875404 (si:ch73-62b13.1)
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108875404 (si:ch73-62b13.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
108875404
NCBI-ProteinID:
XP_018519835
UniProt:
A0A4W6EV81
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Position
LG10:complement(18710102..18716880)
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AA seq
434 aa
AA seq
DB search
MREGCRARGGGRMECSWKTVLLLVCASLGVQYTAIRTLRDSLSGPCQGAYRCQTRHHRDS
RWRALCDDSWMPVESPRKHILLFATTRSGSSFTGQLLNQHPGIFYVFEPLYHVQQAFTNS
SSRLRRTLDRRALLGAYRDLLLNLYTCDLHFMENYIRPEPQDHITSSFFRRSSSHALCSP
PVCLEGGDAAASDPPDETWCPKKCGALNLTLASMSCLSRGHVAIKTVRVPEVGDLRTLTE
DPRLDLKIIHLVRDPRAILASRMMAFSDQFRAWKIWNATGRQPRYVDLSQITSTCKDMVA
SAETGLQRPAWLRGRYLLVRYEDLALNPKDKATEIYRFVGLEMEDRVQMWISKNTNSNTS
SPSEWNYRYSTTRDSRATAESWRLRLGFEIVRTVQNLCNDTLALLGYKQVHSAAQLRNLS
HSLVEHRTFQPVTW
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagggatgtagagccagaggggggggcaggatggagtgttcctggaagacggtg
ctgctgctggtgtgcgcttccctaggggtccagtacacggccatccgcaccctaagggac
tcgctgtctgggccctgtcagggagcttaccgctgccagaccagacatcacagagactcc
aggtggcgagccttgtgtgacgacagctggatgcctgtcgagtcgcctcggaaacacatc
ctgctgtttgccaccacccgcagtggctcctccttcaccgggcagcttctcaaccagcac
ccagggatcttttacgtgtttgagccgctctaccacgtccagcaggccttcaccaactct
agcagcaggctgcgtcgcaccctggaccgtcgggccctgctcggagcatacagggacctc
ctcctcaatctgtacacctgcgatcttcacttcatggagaattacatccgaccagagccc
caggaccacatcacaagttccttcttccgccgaagctccagccacgccctgtgttcccct
cctgtgtgcttggaaggaggggatgcggcggcctccgatccacctgatgaaacctggtgt
cctaagaagtgtggggccctgaacctgactttagcttccatgtcatgtctgtcaagagga
cacgtagccataaagactgtgcgggtccctgaggttggggacctgcgcaccctgactgaa
gatccacgtctggacctgaagatcatccacctggtgagggaccccagagcgatcctcgcc
tcacgcatgatggcattttcagaccagttccgtgcttggaaaatatggaacgcaactgga
cggcagcccaggtacgtggacctgtcgcagattaccagcacctgtaaggacatggtggcc
tcagcggagacaggcctgcagagacccgcgtggctgcggggacgctacttgctggtgcgg
tatgaggacctggcgttgaatccaaaggacaaggccactgagatctacaggttcgtgggg
ctggagatggaggacagggtgcagatgtggatctcaaagaacaccaacagtaacacgtca
tctccgtctgagtggaactacagatactccaccaccagagactccagagcgacagcggag
agctggaggcttcggctcggcttcgagattgtgaggactgtgcaaaacctgtgtaatgac
accctggctctgctgggatacaagcaggttcactctgcagctcagctcagaaacttgtcc
catagtttagtggaacacaggacatttcaaccagtcacatggtag
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