KEGG   Lates calcarifer (barramundi perch): 108875433
Entry
108875433         CDS       T04895                                 
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04620  Toll-like receptor signaling pathway
lcf04621  NOD-like receptor signaling pathway
lcf04622  RIG-I-like receptor signaling pathway
lcf04623  Cytosolic DNA-sensing pathway
lcf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108875433
   04621 NOD-like receptor signaling pathway
    108875433
   04622 RIG-I-like receptor signaling pathway
    108875433
   04623 Cytosolic DNA-sensing pathway
    108875433
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108875433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108875433
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    108875433
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 108875433
NCBI-ProteinID: XP_018519912
UniProt: A0A4W6EII9
LinkDB
Position
LG10:17514806..17519479
AA seq 437 aa
MQSPPKPQFASWLIEQVETGQYTGLCFVGQNKFRVPWKHNSRKDCKDEDSKIFRAWAVAS
GKINEFPTDKARWKTNFRCALNNLSVRFKMIKDNSKNSEDPHKIYEIINTEHNYENQPTQ
DSQEDSFMTPNIYSSPTEYFPSGNEHNLVNNLMALELDNHPTEDQQWVENYCQPNPAVLG
SYPVAAENHLQVLPAQQPYHEVHPTPVLPLPLQPTIYDLEISIHYRKTEMLKTTLSATRL
QLHYQHVDPGLNAHQLCFPSTDGLIDHKQIDYTNRILNSIQRGLLLEVRETGIYAWRQDR
CHVFASTSDPSVAHPDPRKLPQNTTVELLSFEKYVNELKKFKENNGGSPDYTINMCFGEK
FPDGKPLEKKLIMVKVVPLICRHFHEIAQMEGASSLHSANVSLQMSHNSLYDLINSVFGL
PMAEEPGRAAEPILHHI
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgcaaagccctccaaagcctcagtttgccagctggctcatagagcaagtggagacgggc
cagtacacgggcctgtgctttgtgggccaaaacaagttcagagttccctggaagcacaac
tccagaaaggactgcaaggatgaggacagtaaaatattccgggcatgggcggtagcaagt
ggcaaaatcaacgagttccccaccgacaaggcaaggtggaaaaccaacttccgctgcgct
cttaacaacctctccgtgcgcttcaagatgatcaaggataactccaagaattctgaagac
cctcacaaaatctatgagattatcaacactgagcacaattatgaaaatcagcccacacaa
gactcccaggaggattctttcatgactccaaatatctacagctctcccacagagtacttc
ccctcaggaaatgagcacaatctggttaacaatttaatggccttggaacttgacaaccat
cccacagaggaccaacagtgggtagagaactactgccagcccaatccagctgtccttgga
agttatcctgttgcagctgaaaaccacctacaggttttgccagctcagcagccttaccac
gaggtgcatcctacgccagtcctccctttacctctgcagccaactatttatgacctggag
atctccatccactacaggaaaacagaaatgttaaagaccacgttgtccgctacccgtctc
cagctccactaccaacacgtggaccccgggctcaatgcccatcagctctgcttcccctcc
accgatggtcttatagaccacaaacagattgattacaccaaccgcatcctcaacagcatc
cagagaggtctcctcctggaggttcgggagaccggtatatacgcctggaggcaggacagg
tgccacgtgtttgccagcaccagcgaccccagcgtggctcacccagacccaagaaagctg
ccccagaacaccacggtggagctcctcagttttgagaagtatgtaaatgaactgaaaaag
tttaaagagaacaatggtggctctcccgactacaccatcaatatgtgttttggagagaag
tttccagatggaaaaccactggaaaagaaactcatcatggtcaaggtggtccctctgatc
tgtcgacactttcatgagatagcccagatggagggggcttcgtctcttcacagcgccaat
gtcagccttcagatgtcacacaacagtctctatgatctcattaactctgtctttggtctg
ccaatggctgaagagccagggcgggctgctgagcctatcctacatcacatctga

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