Lates calcarifer (barramundi perch): 108875541
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Entry
108875541 CDS
T04895
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108875541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108875541
04131 Membrane trafficking [BR:
lcf04131
]
108875541
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108875541
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108875541
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108875541
mRNA cycle factors
P-body specific factors
108875541
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Myosins
108875541
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108875541
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108875541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Ac76
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108875541
NCBI-ProteinID:
XP_050924994
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MSVNELYTKFTRVWIPDPEDVWRAAEISRDYKEGEPVLHLKLEDETPLEYPIGPKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNHIYTYCGIVLVAINPYEQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTTAEDFTYTSLGENIFIEGVN
DAEDFEKTREAFTLLGIKESSQINIFRVIASILHLGNIEICPERDGESCHVSRDDLHLKH
FCRLLGVELQQMEHWLCHRKLATASETYVKTMSSKQAANARDALAKHIYARMFDWIVEHI
NMSLQTSSKQHSFIGVLDIYGFETFELNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHGSSAHFQK
PRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHDKDDPPP
SKSSRVNVRAAKSVPKVPNKDHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDYKEA
FSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKSDMMSSDKKLVCK
NLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRAACIKIQTTVRGWLQRVRYRK
IRKSAITLQRYGRGYLARSVLTTCRCCRPGTAEYLRLTRAALICQKQYRMVRDRRAYLRV
RQAVVTIQAYTRGMFTRRIYWEFLLHHKAMIIQRSVRGWLQRRKFRRARNAAIIIQCAFR
RLRAKRQLKQLKIEARSAEHLKKLNTGMENKIVQLQRKMDDQSKEYKAQNEQLQMVNASL
GSEVTKLQKQLEVIRGQQGDGGQLTSLQDELERLREELQEAQAERKRMEEEHSTEKLSLQ
QRVEELERENSLLKSEKEEMNQRILQQSKSSEADGGGASQREESLQSELDAERQRYQNLL
KEFSRLEQRYDNLKEELSLSKFQPGHRRNPSNQSSLESDSNYPSVSTSEVGDTEDSIQLV
EEMGVEKAAMDISLFMKLQKRVRELEQERKRLQISVDKMEELAKRRGSEAKSPTSEQDTA
DLAYNSLKRQELESENKKLKNDLNELRKTVAERASQNSSSNELQDGYNLLLSQLKAANEE
LDARKEEVLILRTQILSTAQLQEKNQHIESNNVPEVNDSKEPVDKDEALKAYHGLTESKK
LLEAQLQTQSRQHKDELEALHTQIELLKDDIEKKQEILNYTMSLSPEAQVEYSVQQEITR
LTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEASQAAAVTGRSRPELSRQVTVQR
KEKDFEGMLEYYKEDEALLIKTLITDVKPSTVSATVPCLPAYILFMCIRHADYINDDQKV
ESLLTSTINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGDEVFMTQNTAKQNEHC
LKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKPMGYRNR
SSSMDTDAGGPTSYTLEALIRQLGQFHGTMRDHGLDPEIVGQVVRQLFHCINAVTLNNLL
LRKDVCSWSTGMQLRYNTSQMEEWLRGNNLYQSKAAATLEPIIQAAQLLQVKKKTSQDAE
AICSLCTALTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDPPQLLVDTKHTF
PVLFPYTPSALSLETLHIPASLGLDFLIRV
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacgagctgtacacaaagttcacccgggtctggatcccggaccctgaggat
gtgtggagagctgcagagatcagcagagactataaggagggagagccggttctccacctc
aaactggaggatgagacgcctctggagtatcctattggtccgaagagtaaccccctccct
ttcctgcgtaaccctgacatcctggtgggggagaacgacctcactgctctcagttacctg
catgaacctgccgtcctgcacaacctcagagttcgcttcctggagtccaaccacatctac
acctactgcggcatcgtcctggtcgccatcaacccgtacgagcagctgcagatttatgga
gaggaggtcatcaacgcctacagcggtcagaacatgggggacatggaccctcacatcttc
gctgtggctgaggaggcttataaacagatggccagagacgagaggaatcagtcgatcatc
gtcagcggagaatcaggagcaggaaagacggtttctgcaaagtacgccatgaggttcttc
gccaccgtgggaggttcagctaacgacaccaacgtggaggagaaggttctggcctccagt
cccatcatggaggcgatcggaaacgcaaaaaccactcggaacgacaacagcagtcgcttc
gggaagtacatccagatcggtttcagccgacactaccacatcatcggggccaacatgagg
acctacctgctggagaagtccagggtggttttccaggctgaagacgagaggaattatcac
atcttctatcaactctgtgcctccgcctcgctgccagagttcaaagacctgagcctcacc
actgcagaggacttcacctacacgtctttaggggagaacatcttcattgagggcgtgaac
gacgctgaggactttgagaagaccagagaggccttcactctgctgggtataaaggagagc
agtcagatcaacatcttcagagtcatcgcctccatccttcacctgggaaacattgagatc
tgtcctgagagagacggagagtcctgtcacgtctcgagagacgacctccacctgaagcac
ttctgccggctgctgggggtggagctgcagcagatggagcactggctctgtcacaggaag
ctggccaccgcctccgagacctacgtcaagaccatgtccagcaaacaggcggccaacgcc
cgcgacgccctcgccaaacacatctacgcccgcatgttcgactggatcgtggagcacatc
aacatgtcgctgcagacgtcctccaaacagcactccttcatcggggtcctggacatctac
gggttcgagacgttcgagttgaacagttttgagcagttctgcatcaactacgccaacgag
aagcttcagcagcagtttaactctcatgtgtttaaactggagcaggaggagtacatgaag
gagcagatcccctggactctgattgacttctacgacaaccagccctgtatagacctgatc
gaggctcggctcgggatcctggacctgctggacgaggagtgtaaagtgccgaagggaaca
gatcagaactgggcccagaaactctacaagcagcacggcagcagcgctcacttccagaaa
cctcgtatgtccaacacctccttcatcatcatacactttgctgacaaggtggagtatcag
tgtgaagggtttctggagaagaacagagacaccgtctacgaggagcagatcaacatcctg
aaggccagtcagtttcagctcgtagcagatctgtttcatgacaaagacgaccctccgccc
tctaagagctccagagtgaacgtgcgagcggcgaagtcggttcctaaagtcccgaacaaa
gatcacaggaagacagtgggacaccagttccgcagctccctgcacctcctcatggagact
ctgaacgccaccaccccccactacgtccgctgcatcaaacccaacgactacaaagaggcc
ttctcgttcgactcgaggcgagcggtgcagcagctcagagcctgtggagtcctggagacg
atccggatcagtgctgctgggtacccgtccaggtggacgtatccagacttcttcaacagg
taccgagtgttgatgaagaaatctgacatgatgtcatcagacaagaagctggtctgtaaa
aacctgctggagactctgatcaaggaacccgacatgttccagttcgggaaaacgaagatc
ttcttccgggcggggcaggtggcgtacctggagaagctccggaccgacaagttccgcgca
gcctgcatcaagatccagacgacggtgagaggctggctccagagagtccggtaccgcaag
atccgcaagtccgccatcaccctgcagagatacggccgaggatacctggcccgcagtgtg
ttgaccacctgtcgttgttgtcgtccaggtactgctgagtacctgcgtctgacccgagcc
gccctcatctgtcagaaacagtaccgcatggtgagagatcgacgggcgtacctgagagtg
agacaggctgtggtcaccatccaggcctacaccagagggatgttcacccgcaggatctac
tgggagttcctcctccaccacaaagccatgatcatccagaggagcgtgcgcggctggctg
cagaggaggaagttcagacgggccagaaacgccgccatcatcatccagtgtgcgttcaga
cgcctgcgagcaaaacgccaactcaaacagctgaagatcgaagctcggtcggcagaacac
ctgaagaagctcaacacggggatggagaacaagatcgtccagctgcagaggaagatggac
gaccagtctaaagaatacaaagctcagaacgagcagctgcagatggtcaatgccagtctg
ggctcggaggtgaccaaactgcagaagcagctggaggtgatccggggtcagcagggtgac
ggaggtcagctgacgtctctgcaggacgagctggagaggctgagggaggagctgcaggag
gcgcaggccgagaggaagaggatggaggaggagcacagcaccgagaaactcagcctccaa
cagagggtggaggagctggagagagaaaactctctgctgaagagcgagaaagaagaaatg
aaccagaggatccttcaacagtcgaagagctcagaggcagacggcggcggagcgtctcag
agggaggagtctctccagagtgagctggacgctgagaggcagcgataccagaacctgctc
aaagagttctccagactggagcagagatacgacaacctgaaggaggagctgtctctgagc
aagttccagcccggccacaggaggaacccgtccaatcagagcagcctggagtcggactcc
aactacccgtctgtctccacctcagaggtcggagacactgaggactccatccagctggtg
gaggagatgggggtggagaaggcagcgatggacatcagtctgttcatgaagctgcagaaa
cgtgtcagagagctggagcaggagaggaagaggctgcagatcagcgtggacaagatggag
gagctcgccaagcgcaggggctcagaggccaagagtcccacctccgaacaggacactgca
gatctggcctacaacagcctcaagagacaggagctggagtcagagaacaagaaactgaag
aacgacctgaacgagctgaggaagacggtggccgagcgggcgtctcagaacagctcgtcc
aacgagctgcaggacggatacaacctgctgctgagtcagctcaaagccgccaatgaggag
ctggacgcccgcaaggaggaagtcctgatcctcaggactcagatcctcagcacggcccag
ctgcaggagaagaaccagcacatagagagtaataatgttcctgaggtgaacgacagtaaa
gagcctgtggacaaagacgaggctctgaaggcctatcacggactgactgagtccaagaag
ctgttggaggcccagctgcagactcagtccagacaacacaaagacgaactagaggctctt
cacactcagatcgagctgctgaaggacgacatcgagaagaagcaggagatcctcaactac
accatgtccctgtctcctgaggctcaggtggagtacagcgtccagcaggagatcacccgg
ctcaccaacgacaacctggacctcaaggagctggtggagaaactggagaagaacgagagg
aagctgaagaagcagctgaggatctacatgaagaaagtccaggagttagaagcctctcag
gctgcagccgtcaccggcaggtccagacctgagctcagccggcaggtcaccgtccagagg
aaggagaaggactttgaggggatgttggagtactacaaggaggacgaggccctgctcatc
aagaccctgatcactgacgtgaagcccagcacggtgtcggcgaccgtcccctgcctcccg
gcttacatcctcttcatgtgcatccgccacgccgactatatcaacgacgaccagaaggtg
gagtctcttctcacctccaccatcaacgccatcaagaaggtcctgaagaaaaacaacgat
gactttgagatgacgtcgttctggttggccaacaccagccgcctgctgcactgtctgaag
cagtacagcggagacgaggtgtttatgactcagaacacggccaaacagaacgaacactgt
ctgaagaacttcgacctggccgagtaccgacaggtgctgagcgacctctccatccagatc
taccagcagctcattaaggtggcggagggcatcatccagcccatgatagtgtcggccatg
ttggagagcgagagcatccccagcctggcgggcgtgaagccgatgggctacaggaaccga
tcgtccagcatggacacggacgccggcggccccaccagctacaccctggaggccctgatc
agacagctgggccagttccacggcaccatgagggaccacggtctggacccagagatcgtg
ggtcaggtggtccgacagctgttccactgcatcaacgccgtcaccctcaacaacctgctg
ctgcgcaaagacgtctgctcctggagcaccggcatgcagctcaggtacaacaccagtcag
atggaggagtggctgagaggaaacaacctgtatcagagtaaagctgcagccacgctggag
ccgatcattcaggccgctcagctgctgcaggtcaagaagaagacgtctcaggacgcagag
gccatctgctcgctctgcaccgccctcaccatgcaacagattgtgaagatcctgaacctc
tacacgcctctgaacgagtttgaggaaagagtcactgtgtccttcatcagaaacatccag
aaccggctccaggagaggaacgatcctcctcagctcctggtcgacaccaaacacaccttc
cctgtcctcttcccctacaccccctccgccctgagcctggagacgctgcacatccccgcc
tccctcggcctcgacttcctcatcagagtctga
DBGET
integrated database retrieval system