Lates calcarifer (barramundi perch): 108875548
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Entry
108875548 CDS
T04895
Symbol
nkx6.1
Name
(RefSeq) homeobox protein Nkx-6.1
KO
K08030
homeobox protein Nkx-6.1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108875548 (nkx6.1)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108875548 (nkx6.1)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Tryp_inh
ABC_trans_N
PKK
Motif
Other DBs
NCBI-GeneID:
108875548
NCBI-ProteinID:
XP_018520064
UniProt:
A0A4W6ELZ1
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Position
LG9:20509371..20514355
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AA seq
329 aa
AA seq
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MLAVGQMDGSRQSAFLLSTPPLAALHSMTEMKTPLYPAYPLSSTGPTSSTSPATTSPNPG
GMAVSSPGIKTSSSGSLSSGLGSPQQCSSATPHGINDILNRPSAGATVAVAAAAAAAASS
SAGILSGLPRFSSLSPPPPPGLYFSPGAAAAVAVARYPKPLADLPGRTPIFWPGVMQSPH
WRDARFACSPHQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSL
GMTESQVKVWFQNRRTKWRKKHAAEMASAKKKQDSETERLKGTSDNEDEDDDYNKPLDPN
SDDEKITQLLKKHKPGSALLLHTSENDSS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggtgggtcagatggacgggtcccgacagagcgccttcctcctcagcacgccg
ccgctggccgctctgcacagtatgaccgagatgaagaccccgctgtacccggcctacccg
ctctcctccaccgggcccacctcctctacctcaccggccaccacctcccccaacccgggc
ggcatggccgtgtcctccccggggatcaagacgtcctcgtcgggctccctgtcctcgggg
ctcggctccccgcagcagtgctcctccgccactcctcacgggattaacgacatcctgaac
cggccctccgccggagccacggtggccgtggccgccgccgccgccgccgccgcctcgtcc
tcggcggggatcctgtcggggctgccccggttcagcagcctcagcccgccgccgcctccc
ggactttacttcagccccggcgccgccgcggcggtggcggtggcccggtacccgaagccc
ctggcggacctcccgggcaggacgccgatcttctggccgggagtcatgcagagtccgcac
tggagggacgcccggttcgcctgctccccccatcagaactccgtgttactggacaaagac
gggaagaggaaacacaccagacccacgttctcaggacaacagatctttgctctggaaaag
acttttgaacaaaccaaatatctggcgggaccggagagagcgcggctggcctactctctg
ggcatgacggagagccaggtcaaggtgtggttccagaacagacggactaagtggaggaaa
aagcacgcggcggagatggcctcggccaagaagaagcaggactcggagacggagcggctg
aaggggacctcggacaacgaggacgaagacgacgactacaacaaacctctagacccgaac
tcagacgacgagaagatcacacagctgctgaagaaacacaaaccgggctccgcgctgctg
ctgcacacgtcggaaaacgacagctcctaa
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