Lates calcarifer (barramundi perch): 108875551
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Entry
108875551 CDS
T04895
Name
(RefSeq) malignant fibrous histiocytoma-amplified sequence 1 homolog
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
Roc
COR-B
COR-A
LRR_LRWD1
LRR_9
Ras
LRR_R13L1-DRL21
LRR_13
LRR_5
Bac_thur_toxin
Motif
Other DBs
NCBI-GeneID:
108875551
NCBI-ProteinID:
XP_018520066
UniProt:
A0A4W6EHF6
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All DBs
Position
LG9:20488635..20502556
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AA seq
1029 aa
AA seq
DB search
MKTLNENKEEEEEGSGCNAMEDKENNLKTARLWRDAALRSRKLRSNLRQLTLCSKNNQIT
LPDDIAEIEVLNLGNNSLQELPDGLGSTLNNLRILVLRRNKFTAVPRVVFELGQLVELDM
SHNCLRSLSEGVGQLRGLKKLCISHNKIQNLPAQIGALQLLEELDISFNDLHDLPRSFSS
LGRLRTLDADHNKLNQFPPEILALGELEELDCSGNKFEALPADIMKLRSIKILWLSSLHV
STLPDTFCHLHNLESLMLDGNNLSVLPPSFGNLQRLKMINLSSNEFENFPQVILSITGLE
ELYLSRNKLTHIPEEIGQLVKLVNLWLDNNNITYLPDSIVELEKLEELVLQGNQIAILPD
HFGKLSKVNIWKVKDNPLIQPPYEVCMKGIPYIAAYQKELAHSQLAVKPRLKLVLMGMKN
AGKTRLRQSVVSRQQDVKGIQGNRGIEVTNWVADADRCLTFLVYDLSGKQNYDLIKPFFL
SPGALYILVVNLKTYSPKNFYAHVGYFLHLLSAKVPHAVVCLVGTHADLCGEVEVEEKSL
DIHRQIGLQEKRDIQSLRSLALQVDQALEQGYNVRTSSPHVLFYGVSDRNLRRRKAQLQY
MLNHRLQILSPVLSVSCTETQRNIQRLREKLMSVADHRDIFPNLHRVLPKSWQMLEELHF
KPKDLWLSWWDSARLGLQAGLTEDRLQSALSYLHESGKLLYFEDSITLKEYVFHNLPRFI
AILNVFFQRDESTLLDRLLSEGERGDKGRVSLVIEDEKGENLRVTHLQHHVEGFLQHGLL
PSNVIRLLLRPLIQTQQDLHLIMELLEKMGICYCINKPRSKPLNGATVWYKFPSYVSSEE
PRAEPQAEASAGGSSLPQCHFFSVEQLHIQYSFPFLFPPGLFARFSVQINSHVVQRSDGR
HQIFAYRGKVPVVISHRPSKGKLQAETLSIASHASLPNIWTAWQAVTPLVEELNVLLQEW
PGLHYSVHILCSKCLKRGSSNPHAFPGELLSQPRPEGLTEIICPKNGSERVDVALVYPPT
PTVVSPCLK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactctcaatgaaaacaaggaggaggaggaggaggggtccggctgcaacgccatg
gaggacaaggagaacaatctgaaaacggccaggttgtggagggatgccgccctccgctcc
aggaagctgcggagcaacctgcgccagctcaccctctgctccaagaacaaccagatcaca
ctgcccgacgacatagccgagatagaggtgctcaacctgggcaacaactccctgcaggag
ctgccagatgggctgggatccaccctcaacaacctgcgtatcctggtcctccgcaggaac
aagttcaccgccgtcccccgggtggtgttcgagctggggcagctggtggagctcgacatg
agccacaactgcctgaggagcctctctgagggcgtgggtcagctgagggggctgaagaag
ctatgcatcagtcacaacaaaatccagaatctgccggctcagattggagcgcttcagctc
ctggaggaactcgacatcagcttcaacgacctgcacgacctgcccaggtccttctccagc
ctcggcaggctgcggacgctggatgcagatcacaacaagctgaaccagttcccccctgag
atcctggccctcggcgagctggaggagctcgactgctccgggaacaagtttgaggcgtta
ccagcggacatcatgaagctgcggtccattaaaatcctgtggctcagcagccttcatgtg
tccaccttacctgacacgttctgtcacctgcacaacctggagagcctgatgctggatgga
aacaacctcagcgtgctgccgccttcctttggaaatctacagagactcaaaatgatcaac
ttgtcctctaacgagttcgagaacttcccccaggttattttaagcatcacaggattagag
gaactttacctgagcaggaacaaactgactcatattcctgaggagattgggcagctggtg
aagctggtgaacctttggctggacaacaacaacatcacgtatctgcccgactccatcgtg
gagctggagaagttggaggagcttgttttacagggtaaccaaatagccatacttccagat
cactttggaaagctgtccaaagtgaacatctggaaggtgaaggataaccctctcatccag
cctccgtatgaggtgtgtatgaaggggatcccttacatcgctgcctatcagaaggagctc
gctcattcccagctcgccgtgaagccgcgactcaaactggtcctgatggggatgaaaaac
gctgggaaaaccaggctgaggcagagcgtggtgagcagacagcaggacgttaaaggaatc
cagggaaatagaggaatcgaagtcactaactgggtggccgacgccgatcgctgtctcacg
tttctagtttatgatctgtcagggaagcaaaactacgacctcatcaaacccttttttctg
tcccccggtgctctctacatcctcgtcgtcaatctcaaaacgtattcgcccaagaacttt
tacgcccacgtcgggtatttcctccacctcctcagtgccaaagtaccccacgctgtagtg
tgcttggtgggcacgcatgcagacctgtgtggagaggtggaggtggaggagaagagtctg
gacattcacagacagatcggcctacaggagaagagggacatccagagcctgaggagcctg
gctctgcaggtggaccaggcgctagagcagggctacaacgtccgcacctccagccctcac
gtcctcttctacggcgtctcggacaggaacctgaggcggaggaaggctcagctgcagtac
atgctgaaccaccggctgcagatcctgtctcctgtcctgagcgtcagctgcacggagacg
cagaggaacatccagaggctgagggagaagctcatgtcggttgcagaccacagggacatc
ttccccaacctccaccgcgtgctgccaaagtcctggcagatgctggaggagttgcacttt
aagcccaaagacttgtggctctcgtggtgggactcggcccgtctgggcctccaggcgggg
ctcacggaggaccggctgcagagcgccttatcctacctgcacgagagcgggaagctgctg
tacttcgaggacagcatcactctgaaggagtacgtttttcacaatcttccacggttcatt
gcaattcttaacgtcttcttccagagggacgagtccacgctgttggaccggctcctgtct
gagggggagaggggggacaaagggagggtgagtctggttatagaggacgagaagggagag
aacctcagggtgacccatttgcagcaccatgtggagggcttcctccaacacggccttctg
ccctccaacgtcatccgcctgctgctcagaccgctcatccagacccagcaggacctccac
ctcatcatggagctcctggagaagatggggatctgctactgcatcaacaagccccgcagt
aagcctctgaacggggccacggtgtggtacaagttccccagctacgtcagcagcgaggag
ccccgggcggagccccaggcggaggcctcggccggcggcagctctctgccccagtgtcac
ttcttctccgtggagcagctgcacatccagtacagcttccccttcctgtttcctccggga
ctgttcgctcgcttcagcgtgcagatcaacagccacgtggtccagaggtcggacggccgg
caccagatctttgcctacagaggtaaagtccccgtggtgatcagccaccggccctccaaa
gggaagctgcaggcagagactctgtccattgccagccacgcctcgctgcccaacatctgg
acggcgtggcaggccgtcactccgctggtggaggagctgaacgtgttgctgcaggagtgg
cccggcctgcactactctgtacatattctctgctccaagtgcctcaagagagggtcgtcc
aacccacacgccttcccaggtgagctgctgagccagccgcggcccgagggtctgaccgag
atcatctgtccaaagaacggctcggagcgggtcgacgtggctctggtttaccccccgacc
cccaccgtggtcagtccctgtctcaaatga
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