Lates calcarifer (barramundi perch): 108875606
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Entry
108875606 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: junction plakoglobin a
KO
K10056
junction plakoglobin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04382
Cornified envelope formation
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108875606
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108875606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108875606
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108875606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT
HEAT_2
Adaptin_N
ARMC9_ARM
V-ATPase_H_N
ELMO_ARM
RICTOR_N
Arm_2
Atx10homo_assoc
BORCS7
Motif
Other DBs
NCBI-GeneID:
108875606
NCBI-ProteinID:
XP_018520139
UniProt:
A0AAJ7LCV8
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All DBs
Position
LG5:complement(22776663..22795839)
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AA seq
724 aa
AA seq
DB search
MAMQMGEVDNGVVKVAEWQQTMYGLDSGIQSGATTVRDDDGEYTTSKHYTVTTTVTREQP
ELDSQYTMTRAQRVRAAMFPETLEEGTTILSTQTDPSQMTNVQRLAEPSQMLKTAIIHLI
NYQDDAELATRAVPELTKLLNDEDQVVVSKAAQIVNQLTRKEASRRALMQSPQMVAAVVR
AMQNTSDLETARATASILHNLSHQREGLLSIFKSGGIPALVRMLSSPMESVLFYAITTLH
NLLLHQEGAKMAVRLADGLQRMVPLLKKSNPKFLAITTDCLQLLSYGNQESKLIILANGG
PEGLVHIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLSGSSQRLMQN
CLWTLRNLSDAATKQEGMDSLLQVLVGLLSSDDINMLTCATGILSNLTCNNAHNKTLVTQ
SNGVEALIHAILRAGEKEDVTEPAVCALRHLTSRHQQAEVAQNAVRRHYGIPAIVKLLNQ
PYYWPVIKAVVGLIRNLALCQENQAPLRDAGAIPRLVNLLLKAHQDAQKHGSSAQQTYQD
GVRMEEIVEGCTGALHILARDPVNRAEIANLQTIPLFVQLLYSPVDNVKRVAAGVLCELA
LDKPSAEMIDSEGASAPLMELLHSNNEGIATYAAAVLFRISEDKNSDYKKRVSVELTHSL
FKHDPAAWEMAHNTVPMDGHYPDELDAGFQGYGYAGDIPMDGMDGNMMIDDYTGSVAYDR
QPYA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaaatgggtgaggttgataatggtgtggtgaaggtggcagagtggcagcag
acaatgtatggcctagactcgggcatccagtctggagccaccacagtcagagatgacgac
ggcgagtacaccacctccaaacactacactgtgaccaccactgtcacaagggaacagcct
gagttggatagccagtacactatgaccagagcccagcgggtgagggctgctatgttccca
gagacgctggaagaaggcacaaccatcctgtctactcagacagacccgtcccagatgacc
aacgtccagcggctggctgagccatcccagatgctcaagaccgccatcatccatctgatc
aactaccaggacgacgccgagctagccacacgcgctgtgcctgagctcaccaaactgctc
aacgatgaagaccaggtggtggtcagcaaggcagcacagattgtcaaccaactgacacgc
aaagaggcatcgcgccgcgcgctgatgcagtcccctcagatggtggcagcagtggtgcgg
gccatgcagaacacaagtgacctggagaccgcgcgggccacagccagcatcctccacaac
ctgtcccaccagagggagggcctgctctccatcttcaagtctggaggcatccctgctctt
gtccgcatgctcagttctcccatggagtctgtgctcttctacgccatcaccacgctccac
aacctgctgttgcaccaggagggagctaagatggccgtgcgtctggccgacggcctgcag
aggatggttcccctgctgaagaagagcaaccccaagttcctggccatcaccacagactgt
ctgcagctgctgtcctacggcaaccaggagagcaagctgatcatcctcgccaacgggggt
cctgagggtctagttcacatcatgagaaactacagctatgagaagctgctgtggaccaca
agccgtgtgctcaaagtcctctctgtttgccccagcaacaaacccgccattgtagaggct
ggcgggatgcaggctctgggcaaacacctctccggctctagccaacgtctgatgcagaac
tgcctgtggacgctcaggaacctgtctgacgctgccaccaagcaggagggtatggacagc
ctgctgcaggtgctggtgggcctgctcagctcagatgacatcaacatgctcacttgcgcc
accggcatcctgtctaaccttacatgcaacaacgcccacaacaaaaccctggtcacccag
agcaatggagtggaggcactgatccacgccatattgcgtgccggtgagaaggaggatgtg
accgaacctgccgtctgcgctctgcgccacctgacttcgcgccaccagcaggctgaggtg
gcgcagaatgctgtgaggagacactatggcatccccgccatcgtcaagctgctcaaccag
ccctactactggcctgtcatcaaggctgtggtcggcctgatccgtaacctggccctgtgc
caggagaaccaagcccctctcagggacgccggagcgatcccccgtctcgtcaacctgctg
ctcaaagcccaccaggacgcccagaaacacggctcatctgctcagcaaacataccaggat
ggagtgaggatggaggagattgtggagggctgcacaggagctctgcacatcctggccaga
gatcctgtcaacagagcagagattgccaacctgcagaccattcctctgtttgtgcagctg
ctctattctcctgtggacaatgtgaagcgcgtggcggcaggcgtcctgtgcgagctggcc
ctggacaagccatcggctgagatgatcgacagcgagggagcatcggctccactgatggag
ctgctgcactccaataacgagggcattgctacctacgctgcagctgtgctcttccgcatc
tctgaggataaaaactcagactacaagaagcgagtgtctgtggagctcacacactctctg
ttcaaacacgaccccgctgcctgggagatggcccacaacaccgtccccatggatggacac
tatccagatgaactggacgccggtttccaaggctacggctacgcaggtgacattcccatg
gacggcatggatggaaatatgatgattgatgattacacaggcagtgtggcctacgacaga
caaccgtacgcttag
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