Lates calcarifer (barramundi perch): 108875615
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Entry
108875615 CDS
T04895
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108875615
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lcf04031
]
108875615
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108875615
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
108875615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108875615
NCBI-ProteinID:
XP_018520152
UniProt:
A0AAJ7LEG6
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Position
LG5:23128897..23133400
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AA seq
292 aa
AA seq
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MRGMMGTQSSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGSVESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVANSAASGSSGSSSKANSLKRSKSFRPPQSPPKNSSSSSKGNCKIS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatggggacccagagtagtcctgtcaagagttacgattatctcctgaaa
tttctattggtgggagacagcgatgttggaaagggagaaatcttggaaagtttgcaagac
ggatcagtagagtctccttatgcctacagcagtggaattgattacaagaccaccacaatt
ctgctggatgggaggagagtgaaattagaattatgggacacatcagggcaaggtagattc
tgcaccatcttcaggtcctactctcgtggagcacagggcatcctgctggtgtatgacatc
actaacggctggtcgtttgatggcattgaccgctggattcgggaaattgatgagcatgcc
ccaggtgtgcccaggatcctggtgggaaacagacttcacttggctttcaagcggcaggtg
ccgaccgagcaggcaagggcttatgcggaaaagaacagcatgactttctttgaggtcagt
ccactctgcaacttcaacgtcatcgagtccttcacagaactttcacggatcgtgctgatg
aggcatgggatggagaaattttggaggcctaacagagtcttcagcctccaggatctgtgc
tgccggtcgatcgtctcctgcacaccggtgcacctcattgacaaactgcccctccctgtg
gccatcaagtcccacctcaagtctttctctatggccaatggtatgaatgcagtcatgatg
cacggacgctcctattcagtggccaacagtgcagcctcgggtagcagcggcagcagcagc
aaagccaacagtcttaaacgctcaaagtccttcaggcctccacagagtcctccaaagaac
tcgtcgtcctcctccaaggggaactgtaagatttcatag
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