Lates calcarifer (barramundi perch): 108875626
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Entry
108875626 CDS
T04895
Symbol
myh11a
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-11a
KO
K10352
myosin heavy chain 9/10/11/14
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03273
Virion - Lassa virus and SFTS virus
lcf04270
Vascular smooth muscle contraction
lcf04530
Tight junction
lcf04810
Regulation of actin cytoskeleton
lcf04814
Motor proteins
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108875626 (myh11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108875626 (myh11a)
09142 Cell motility
04814 Motor proteins
108875626 (myh11a)
04820 Cytoskeleton in muscle cells
108875626 (myh11a)
04810 Regulation of actin cytoskeleton
108875626 (myh11a)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108875626 (myh11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108875626 (myh11a)
04147 Exosome [BR:
lcf04147
]
108875626 (myh11a)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108875626 (myh11a)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
108875626 (myh11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Myosin_head
Myosin_N
ADIP
ERM_helical
Crescentin
CC2-LZ
PUMA_CC
IQ
AAA_22
Motif
Other DBs
NCBI-GeneID:
108875626
NCBI-ProteinID:
XP_018520167
UniProt:
A0AAJ7LF04
LinkDB
All DBs
Position
LG5:23695221..23723641
Genome browser
AA seq
1978 aa
AA seq
DB search
MSKKAPSEDEKFLFVDKDFLNSPMAQADWAAKKLVWVPSEKHGFEAASIKEEHGDEVLVE
LADNGKKVTVNKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLF
CVVVNPYKMLPIYSEKIIDMYKGKKRHEVPPHIYSITDNAYRNMMQDREDQSILCTGESG
AGKTENTKKVIQYLAVVASSHKGKKDSSAQQSGAQFAYGELEKQLLQANPILEAFGNAKT
IKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRCIRQAKTERAFHIFYYMIAGAKD
KLREELLLEPFSNYRFLSAGHVQIPGQQDDEMYEETMEAMKIMGLTDEERIDILKVCSTV
MQLGNIEFKKERNQEQATMPDNTAAQKVCHLQGINVTDFTRAILTPRIKVGREVVQKAQT
KEQADFAIEALAKAVFERLFRWILGRVNKALDKTKRQGASFLGILDIAGFEIFEDNSFEQ
LCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPNNPPGILA
LLDEECWFPKATDVSFVEKLMNTQGNHIKFAKPKQLKDKTEFSILHYAGRVDYNATAWLT
KNMDPLNDNVTALLNNSSSQFVQELWKDADRVVGLDTIAKMSDSSMPSASKTKKGMFRTV
GQLYKESLAKLMTTLHNTQPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQ
GFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACCLMIKHLDLDPNLYRIGQSKIFFRTG
VLAQLEEERDLKITVIIIAFQAQARGFLARKAFAKRQQQLTAMKVIQRNCAAYLKLRNWQ
WWRLFTKVKPLLQVTRQEEEMSLKEEELQKAKEVATKFESELKEITLKHTSILEERNALQ
EQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLDEEEERSQTLLVEKKKMQQQMQ
ELEEHLEEEEDARQKLQLEKVTCEGKIKKLEDDILVMEDQNNKLLKERKLLEERVADFSA
NLAEEEEKSKNLTKLKNKHESMISELEVRLKKEEKSRQELDKAKRKLEAESNDLQEQIAD
LQAQIADLKAQLAKKEEELQNALARLEDETAQKNNALKKIRELEGHISDLQEDLDSERAA
RNKAEKIKRDLGEELEALKSELEDTLDTTATQQELRAKREQEVTLLKRAIEDENRTHEAQ
VQEMRQKHTQAVEELTEQLEQSKRVKSNLEKAKQALEKETSELTMEVRSLTQAKQDGEHK
RKKLEGQVADLQSRFNDSEKQKAELGERCSKITVELESVTNLLNEAEGKNIKLSKDVSSL
TSQLQDTQELLAEETRQKLQFSTKLRQAEDDKNSLQEQLEEEAEAKRNVERHVSTLNIQL
SDAKKKLDEMSGNIELLEEGKKRLQRDLEAANTQFEEKASAYDKLEKTKNRLQQELEDTL
MDLDNQRQNVSNLEKKQKKFDQMLAEEKSISSKYADERDRAEAEAREKETKALSLARALE
EAQDAREELERANKALRMEMEDLISSKDDVGKNVHELEKSKRGLEAQVEEMKTQLEELED
ELQAAEDAKLRLEVNMQALKAQFERDLQGRDEMGEEKKRQLVKQVRELETELEDERKQRA
LAAAAKKKLETDMKDLEGQIETANKGRDEAIKQLRKLQGQMKDFQRELEDARAAREEVLT
TAKESEKKAKSLEAELMQLQEELAAAERARKQAEAERDELSDELASNSSGKSALADEKRR
LEAKISQLEEELEEEQSNMEILNDRLRKSTQQVDQLNNELQTERSTSQKNESARQQMERQ
NKELKAKLQEMENQVKSKFKSSISALEAKVAQLEEQLEQENRDKQASAKSIRQKDKKLKD
LIMQVEDERKQAEQYKDQADKANTRMKQLKRQLEESEEESQRATAARRKLQRELDEATEA
NDAMSREVNSLKSKLRRGNEPSFSSAPRRLGGGRRVVEDASEEEADSQGDFNGTKSAE
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaggccccaagcgaggacgagaagttcctctttgttgacaaagacttcctg
aacagccctatggcacaggccgactgggcagccaagaagctggtgtgggtcccgtcggag
aagcatggcttcgaggcggccagcatcaaggaggagcacggtgacgaggtgctggtggag
ctggctgataacggcaaaaaggtgacagtcaacaaggatgacatccagaagatgaacccg
cccaagttcagcaaggtggaggacatggccgagctcacctgtctgaacgaggcctctgtg
ttgcacaatctccgcgagaggtacttctctggcctcatatatacatactctggcctgttc
tgtgtggtggtgaacccctataaaatgctgccaatctactcagagaagatcattgacatg
tacaaagggaagaaacgacacgaagtccccccccatatctactccatcactgataacgcc
tacagaaacatgatgcaagatcgtgaggaccagtccattctctgcaccggggagtctggt
gctggaaagacagagaacactaagaaggtcattcagtatctggctgttgtggcctcctca
cacaaaggcaagaaggacagcagtgctcaacaatcaggagcacagtttgcctacggggag
ctggagaagcagctcctgcaggccaatcccatcctagaggcctttggaaatgccaagacc
atcaaaaatgacaactcttcccgatttggaaaattcatccgtatcaactttgatgtgacc
ggctacattgttggagccaatattgagacctacctgctggagaagtctcgctgtatcaga
caggcaaagacagagagagcttttcacatcttctactacatgattgctggcgccaaggac
aaactgcgtgaggagcttcttctagagcccttcagtaattaccgcttcctgagtgcgggc
cacgttcagatccctggccagcaagatgatgagatgtacgaagagaccatggaggccatg
aagatcatgggcttaactgatgaggagagaatcgatatcctcaaggtgtgctccacagtg
atgcagctgggaaacattgagttcaagaaagagaggaaccaggagcaggctactatgcca
gacaacaccgcggctcagaaggtgtgccacctgcagggcatcaatgtgacagactttact
cgtgccattctcacccctcgaatcaaagtgggcagagaagtggtgcagaaggcacagacc
aaagagcaggctgactttgctattgaagcccttgccaaggctgtgtttgagcggctcttc
cgctggatcctgggccgagtcaacaaagccctggacaaaaccaaacgccaaggagcctcc
tttctgggaatcctagacattgccggctttgaaatctttgaggataactcctttgagcag
ctgtgcatcaactacaccaacgagaagctgcagcagctcttcaaccacaccatgttcatc
ctggagcaggaggagtaccagagggagggcatcgagtggaacttcattgactttggcctc
gacctgcagccttgcattgagctcatcgagagaccaaacaacccccctggtatactggcc
ctgctggatgaagagtgctggttccccaaagccacagatgtctcctttgtggagaaactc
atgaacacacaaggaaaccatatcaaattcgccaagcctaaacagctcaaagacaagaca
gagttttctatccttcattatgctgggagagtggactataatgccacagcatggttgaca
aagaatatggatcctctgaatgacaatgtcacagcgctgctcaacaactcatccagccag
tttgtgcaagaactctggaaagatgcggacagagtggttggtctcgacacgatagctaag
atgtcggacagctccatgccgagcgcctcgaagaccaaaaagggaatgttccgtacagtg
ggacagctctacaaggagtctctggccaaactcatgaccacactgcacaacacccagccc
aatttcgtcagatgcatcatccccaaccacgagaagagggcagggaagctagatgctcac
ctggtcctggaacagctgagatgtaacggtgtgttggaggggatcaggatctgccgacaa
ggatttcccaaccgaatcgtcttccaggagttccgccagcgctatgagatcttggctgct
aatgctattcccaaaggtttcatggatggtaaacaagcctgctgcctcatgatcaaacat
ctggacctggaccccaacctatacaggattggacagagtaagatctttttccgcacagga
gtgttggcccagctggaggaggagagagatctgaagatcactgtgatcatcatcgctttc
caggcccaggctagaggcttcctggccagaaaggcatttgcaaagaggcaacagcagctc
acagccatgaaagtgatccagaggaactgtgctgcctacctcaaactcaggaactggcag
tggtggaggctcttcacaaaggtcaagcctctgctgcaagtgacccgccaggaggaggag
atgagtctgaaggaggaagagttgcagaaagccaaagaagttgctacaaagtttgaatct
gagctgaaggagatcaccttgaaacacacatcgattttggaggagagaaacgcactgcag
gagcagcttcaggcagagacagagctgtatgccgaggccgaggagatgagagttcgtctg
gcggcaaagaagcaggagttggaggagatccttcatgagatggaggcgaggctggacgaa
gaggaagaacgatctcagacgctgctggtggagaagaagaagatgcaacagcagatgcag
gaattggaggaacatttggaagaggaagaggatgcccgtcaaaagctgcagctagagaag
gttacctgcgagggaaagatcaaaaagcttgaggatgacatcctggtaatggaggaccag
aacaacaagttgctgaaggagcggaagctgttggaggagagagttgcagacttcagtgcc
aatctggctgaggaggaggagaagtcaaagaacctcaccaagctcaaaaataaacacgag
tccatgatctctgaattagaagtccgcttgaagaaagaagaaaagagtcgccaggagctg
gacaaggctaagcggaagttggaggcagagtcaaacgacctacaagagcagatagccgac
ctgcaggctcagatcgctgacctcaaagctcagctcgccaaaaaggaggaggagttacag
aacgccttggcaaggttagaagatgagacagcccagaagaacaatgctctgaagaagatc
agagagctggagggacacatctctgacctgcaggaggacctggactctgagcgggccgcc
aggaacaaggcagagaagatcaaacgggacctcggggaggagctggaggccctcaagtct
gagctagaggacacactggacaccactgctactcaacaagaacttagagccaaacgtgaa
caggaggtcaccctgctgaagagagccatcgaggacgagaaccgaacccacgaggcccag
gtccaggagatgagacagaaacacacccaggctgtggaggaactcacagagcagctggag
cagtccaaacgagtgaagtcaaacctggagaaggctaaacaagctctggagaaggagaca
tcagaattaaccatggaggtgcgctcactgacccaggccaaacaagacggggagcacaag
aggaagaagctggaaggtcaggtggcagatctgcagtcacgcttcaacgacagcgagaag
cagaaggctgagctgggagagcgctgctccaagatcactgttgaacttgagagtgtaaca
aacctactgaatgaagcagaaggaaagaacatcaaactgagcaaagatgtcagcagttta
acctcccaactgcaagacacacaggagctgctggctgaggagacacgtcagaagctgcag
ttctctacgaagctccggcaagcagaagacgacaagaacagtttgcaggaacagcttgag
gaagaggcggaggccaagaggaacgtggagagacacgtgtccaccctcaacatccagcta
tcagatgcaaagaagaagctagatgaaatgtcaggaaacattgagctgcttgaagaaggc
aagaaacgtctgcagagagatttggaggcagcaaacacccagtttgaggagaaggcttcg
gcgtacgacaagctggagaagaccaaaaatcgtctgcagcaggagctggaggacacgctg
atggacctggacaaccagagacagaacgtgtcaaacctggagaagaaacagaagaagttt
gaccagatgctggctgaggagaagagcatctccagtaaatatgcagatgagagagaccgt
gctgaagctgaggccagagagaaggagaccaaagctctgtccttagcgagagctctggaa
gaggctcaggatgccagagaggagctagagagagctaacaaggccctgaggatggagatg
gaggaccttatcagctccaaggatgatgtgggaaaaaatgtccacgagctggagaagtcc
aagcgaggcctggaggcccaggtggaggagatgaagactcagctagaggagctggaggac
gagctgcaggcggccgaggatgccaagctgcgtctagaggtcaacatgcaggccctgaag
gcccagttcgagagagacctccagggacgggatgagatgggagaggagaagaagaggcag
cttgtcaagcaggttcgtgagttggagaccgagctggaggacgaacgtaaacagagggcc
ctggcagcagcagccaagaagaagctggagacggacatgaaagatctggagggacaaatc
gagacagccaataagggacgagatgaggccatcaagcagctccgcaagcttcagggccag
atgaaggacttccagagggagctggaagatgcccgtgctgccagggaggaggtgctgact
actgcaaaggagagcgagaagaaggccaagagtctggaggctgagctcatgcagctgcag
gaggaactggccgcggcagagagggcgaggaagcaggcagaggctgagagagacgagctg
tctgatgagctggccagcaactcctctggaaagtcagccttggcagatgagaagcgccgc
ctggaagccaagatctcccagctggaggaggagctggaggaggagcagagcaacatggag
atcctcaacgacaggctgaggaagagcacgcagcaggtggatcagctgaacaacgagctg
cagacagaacgcagcacctcccagaagaacgagagcgctcggcagcagatggagcgccag
aacaaggagctgaaggccaagctccaggagatggagaaccaggtcaaatccaagttcaag
tcctccatctctgccttggaggctaaggtggcacagctggaggagcagctggagcaggag
aacagggacaagcaggcttctgcaaagagtatacgccagaaagacaagaagctcaaggac
ctgatcatgcaggtggaagacgaaagaaaacaggcagagcagtacaaagaccaggcggac
aaggcaaatactcgcatgaagcagctgaagaggcaactagaggagtcggaggaggagtct
cagcgcgccacagccgcccgcaggaagctgcagcgggagctggatgaagccaccgaggca
aacgacgccatgagccgcgaggtcaactcactcaagagcaaactcaggcgtggaaacgag
ccctcctttagtagcgcacctcggcgtttgggcggaggccgaagggtagtcgaggatgcc
tcagaggaggaggctgactcccagggtgacttcaacgggacaaagtctgcggagtaa
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