Lates calcarifer (barramundi perch): 108875636
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Entry
108875636 CDS
T04895
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108875636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108875636
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Others
GGA
108875636
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha_adaptinC2
VHS
GAT
GGA_N-GAT
Hrs_helical
LMBR1
DUF848
Ferritin
HEAT_Maestro
Luteo_P1-P2
PCRF
HisKA
Motif
Other DBs
NCBI-GeneID:
108875636
NCBI-ProteinID:
XP_050926765
UniProt:
A0AAJ8B6S9
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Position
LG5:complement(23786829..23796123)
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AA seq
599 aa
AA seq
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MQALTVLETCMKNCGKRFHNEVGKFRFLNELIKVVSPKYLGTRAPEPVKKKVLEMMFSWT
VRLPDETKIAEAYQMLKKQGIVKQDPVLPDDKPLPPPPPRAKSAVFEDEEKSKMLSRLLN
STHPEDLRAANKLIKEMVQEDQKRVEKVSKRVNAIQEVKESVSLLSQLLEGYSKESCSQS
NQELIKDLYQRCEKMRPTLFRLASDTEDNDEALADILQANDSLTQVINQYRQLVKGEEVP
KDGDSHALTTSNSSALVDLMGLNASANTALSNPESSSLQTLTQSMGINLLDDELMSLGLN
VTENCVSQNTFQSSNSTESSAPSVPATVLLPAVVQTQQALPAGGSTAPPKAMEELDLLGK
TLLQQSLPPESQQVKWDKLQPQSRVTLRDLQTKSSTNSRPAPPATTTSSGPALPPGPMSS
LAIQSEQPDALLLSNLSLTAAEKGVSPAADLYDNISLADVTVPLESIKPSSLLPVTVFDK
HSLRVLFTFARDCPPARPDVLVVIISMLSSAPIPVTNIRFQAAVPKVMKVKLQPPSSTEL
PAFNPIMPPAAITQILLLANPQKEKVRLRYKLTFNLGDKSHDESGDVDQFPPPNTWGSL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacttacagttcttgagacgtgcatgaagaattgcggaaaacgatttcataat
gaagtgggaaagtttcgctttctcaatgaactcatcaaggtggtgtcacccaagtattta
ggtaccagggctccagaaccagtgaagaagaaggttttggaaatgatgttcagctggacg
gtgaggctgccagatgagaccaagatagcagaggcatatcagatgctgaaaaaacagggt
attgtcaagcaggatccggtgcttcctgatgacaagcccctcccaccccctccacccaga
gccaaaagtgccgtctttgaggatgaggagaaatccaagatgctgtctcgcttattgaac
agcactcacccggaagatctaagagctgcaaacaagctcattaaggaaatggtccaggaa
gaccaaaaacgagtggaaaaggtatcaaagcgagtgaacgccatccaggaggtgaaggag
agtgtcagcctgctgagccagcttctggagggctacagcaaagagagctgctcccagagc
aaccaagagctcattaaggatctttatcagcgctgtgaaaagatgaggcccacgctattc
cgattagctagtgatacagaggataatgacgaagccctagcggatatcttacaggccaat
gacagcttaacacaggtcatcaatcagtacagacagctggtaaagggggaggaggtgcca
aaagatggcgatagccacgccctcacaaccagcaatagctcagcacttgtggacctgatg
ggacttaatgcatcagccaacacagcactctccaacccagagtcctccagtctgcagacc
ctgactcagagcatgggtatcaacctcttggatgatgaactcatgtctctgggactgaat
gtaacagaaaactgcgtctcccagaacacttttcagtcctctaatagcacagaatcatct
gctccatcagtaccagctactgtcttgctaccagctgtggtccaaacacagcaggctcta
ccagcagggggctccactgctccacctaaagccatggaagagctggatttactggggaag
actttgctacagcagtccttacctcctgagagccagcaggttaaatgggataagctccaa
cctcagtccagagtcactttacgagatctccagaccaagtccagcaccaactctagacct
gctcctcctgcaaccaccacctcctctggtcccgctcttcctccggggcccatgtctagc
ctggccatccagtcggagcagcctgacgctctcctcctctccaacctcagtctcacagct
gctgagaaaggcgtgtcacctgctgccgacctttatgacaacatctccttagctgacgta
actgtgcctctggaatcaatcaaacctagcagcttattaccagtgactgtatttgacaaa
cacagcctgcgggttttgttcacctttgcccgtgactgtcctccagcacggcctgatgtg
ctggtggtgatcatctccatgctgtcctcagctcccattcctgtcaccaacattcgcttt
caggcagctgtgcccaaggtgatgaaagtgaaactgcagcctccctctagtactgagctc
ccagcattcaatcccatcatgcctccagctgctatcacacagatcctgctactggctaat
cctcagaaggaaaaagtacgtttgcggtacaaactaacattcaacctgggggacaaatct
cacgatgaatcaggtgatgtggaccagtttccccctccaaacacctgggggagcctctag
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