Lates calcarifer (barramundi perch): 108875642
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Entry
108875642 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: keratin 94
KO
K07604
type I keratin, acidic
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108875642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108875642
04147 Exosome [BR:
lcf04147
]
108875642
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
108875642
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108875642
Exosomal proteins of other body fluids (saliva and urine)
108875642
Exosomal proteins of colorectal cancer cells
108875642
Exosomal proteins of melanoma cells
108875642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Tup_N
ADIP
ASH2L-like_WH
CENP-F_leu_zip
CCDC85
Fib_alpha
ZMYND8_CC
Baculo_PEP_C
APG6_N
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
108875642
NCBI-ProteinID:
XP_050926758
UniProt:
A0AAJ8DQ34
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Position
LG5:22864889..22868188
Genome browser
AA seq
413 aa
AA seq
DB search
MMYNPSGSIIMRQSRSYTSSAPVHKAHSVSGLSYRSAPRVSAVSMRTVSSGFGGSMGAGS
SMGVGGGFDLSSALDQSTIHLNEKATMQNLNDRLASYLDKVRSLEAANAKLEKQIREYYE
QKGPAAERDYSNYWAIINDLKDKIAAATIGNANILLQIDNSKLAADDFKTKYEHELMMRQ
SVEADIANLRRLLDQTTLTKADLEMQIEGLQDELAYLKKNHAEELAALRSQLTGTVNVEV
DAAPQQDLNKILDEVRAQYEAITDKHRRDQESWFNEKSAALTKEVAISTETIQTSKTEIG
DLRRTLQGLEIELQSQLSMKGALENTLAETENRYSAMLAGYQNTINMLEAELANMRASIE
QQGQDYKMLLDIKTRLEQEIATYRSLLETEESRPIGSGGSKTTVTTTTVRTSS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatgtataaccccagtggttccataataatgcgacagagccgcagctacacatcaagt
gcgcctgttcacaaggctcacagtgtgtcaggactcagctataggtcagctcctcgcgtc
tccgccgtctccatgcgcactgtctcctctgggtttggtggtagcatgggggctggcagc
agcatgggggtcggtggtggcttcgatctgtccagcgccctggaccagagcaccatccat
ctgaatgagaaggccaccatgcagaacctgaatgaccgtctggcctcctacctggacaag
gttcgctctctggaggcagccaatgccaagctggagaagcagatcagagagtactacgag
cagaagggccctgcagcagagagagactacagcaactactgggccataatcaatgacctg
aaggacaagattgctgctgccaccatcggcaatgccaacatcctgctccagattgacaac
tccaaactggctgctgacgacttcaagaccaaatatgagcatgagctgatgatgcgccag
tcagttgaggctgacatcgccaacctgcgccgcctgcttgaccagaccaccctgacgaag
gctgacctggagatgcagatcgaaggtctgcaggatgagctggcctacctcaagaagaat
cacgcagaggagctggcagcactgcggtctcagcttactggcacagtcaatgtggaggtt
gatgctgcacctcagcaggacctcaacaaaatcttggatgaggtccgcgcccagtacgaa
gccatcactgataaacatcgtcgcgaccaggagtcctggtttaatgagaagtcggcagcc
ctgaccaaggaggtggccatcagcacagagacaatccaaacgtccaagacagagattggt
gacctgcggcgcacactgcagggcctggagatcgagctgcagtctcagctcagcatgaaa
ggggctctggagaacacgttagcagagacagagaatcgttacagcgccatgctcgctggc
taccagaacacaatcaacatgcttgaagctgagctagccaacatgcgagccagcattgag
cagcagggccaggattataagatgctgctggacatcaagaccaggctggagcaagagatt
gcaacctacaggagcctgctggaaacagaggagtccagacccattggttcagggggctca
aagaccacagtcacaaccaccactgtgcgcacttccagctag
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