Lates calcarifer (barramundi perch): 108875668
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Entry
108875668 CDS
T04895
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 24 isoform X1
KO
K15167
mediator of RNA polymerase II transcription subunit 24
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108875668
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108875668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med24_N
Motif
Other DBs
NCBI-GeneID:
108875668
NCBI-ProteinID:
XP_018520247
UniProt:
A0AAJ7PEQ9
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Position
LG23:complement(6992141..7004167)
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AA seq
989 aa
AA seq
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MKVVNLKQAILQAWKERWSDYQWAINIKKNFPKGATWDYLNLAEALMEQAMIGPSPNPLI
LSYLKYAISSQMVSYSSVLSAISKFEDFSRELCVKSLLEIMDMFCHRLSCHGKAEECIGL
CRALLGVVVWLLQGCAWYCERLRELGPSASTEASLRACQERLHGLMNSTKNRALVHIARL
EEQGSWSSVEQAMLKVTDGLSSIPNQTLRTKLEESLSLVKGIPLMLSVQSDPPVHASFPS
IHAFIMLEGTMNLTGETQPLVEQLMMIKRMQRIPAPLFVLEIWKACFTGLIESPEGTEEL
KWTAFTFLKIPQVLLRLKKYPQGDKGQDFMEDVNVAFQYLLKLTPLLDKADQRCNCDCLG
MLLQECNKLGLLSDSNTASLTSKRTEDREFAPRLKTAENANIQPNPGLILRAEPTVTNIL
KTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGE
GSKSASVRALLFDISFLMLCHVVQTYGSEVILSDPSPSGETPFFETWLQTCMPEEGKTLN
PDHPCFRPEPGKVESLVTLLNNSSEMKLVQVKWHEICLSTPAAILEVLNAWENGVLSVEA
VQKITDNIKGKVCSMAICAVAWLVAHVRMLGRDEREKPQTMIRQLVTPLYGENTLQFYNE
RVIIMSSIMEHMCADVFQQTAATLRPPVEGQEPIPYRNLLPAKEPIHTALSKQFQAVLRK
GWVDSRALHLFESLLNMGGVFWFTNNLVKELLKETRQEWANRVVELLYSIFCLDTQQITL
TLLGTILPNLLTDSAHWHSLADPPGKALAKLSVWCALSSYSSHHKGSFSARQRKRQREDI
EDYNSLFPLDDTQPSKLMRLLSSNEDEPVALSSPGDRSMSSSLSASQLHTVNMRDPLNRV
LANLFLLISSILGSKMAGPHTQFVQSFMEECVECLEQGSRGSILQFMPFTMVSELVKLPA
MAKPKVVLAITDLTLPLGRRVAAKAISAL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtcaatctcaagcaagccattctgcaggcatggaaggagcgctggagtgac
taccagtgggctattaacatcaagaaaaacttcccaaagggagcaacatgggattatctg
aaccttgcagaggccctgatggagcaggcgatgattggtccttctcctaacccccttatt
ttgtcctaccttaaatatgctataagttctcagatggtgtcttattccagtgtgctctca
gccatcagcaagtttgaagatttttctagggagctatgtgtcaagtcgctgttggagata
atggacatgttctgccatcgcctcagctgtcacgggaaagcagaagaatgcattgggctg
tgtcgggctttgctgggagtggtggtgtggctgctgcagggctgtgcctggtactgcgag
aggctgagagaactgggcccatcagccagcacagaggccagtctgagagcctgccaggag
aggcttcacggtctgatgaacagcaccaaaaacagagcccttgtccacattgcacgactg
gaggaacaaggatcctggagcagtgtagagcaagcaatgctgaaagtgacagatggcctc
agcagcatacctaaccagacactgaggactaaactagaggagagcttgtcactagtaaaa
ggtatccccctgatgctgtcagtgcagtctgatcctccagtccatgcctcattcccatca
atccatgccttcattatgctggaagggaccatgaatttgacgggggagacgcaaccactg
gtggagcagctgatgatgatcaagaggatgcagcgaattcctgctcctctttttgtcctg
gagatctggaaggcttgcttcactggcctcattgagtcaccagagggcacagaagagctc
aaatggacggctttcacattcctcaagatcccacaagttttgcttcgactaaagaagtat
cctcaaggtgacaaaggacaggacttcatggaggatgtgaatgttgcatttcagtactta
ctcaagcttactccactgctggacaaagctgatcagagatgcaattgtgactgccttggc
atgctcctacaggagtgtaacaagcttggtctgctgtcagattcaaatacagccagcctc
acttcaaaacggaccgaggacagggagttcgccccaaggctaaagacagcagaaaatgct
aacatccagcctaacccaggtcttatactgagagctgagcccactgtcaccaatatcctc
aagacagtagatgctgaccactccaagtcacctgagggccttctaggggtcttggggcac
atgttgtctgggaagagcctggatctcctcctggcagcagctgcagccactgggaagctc
aagtcctttgcccgaaagttcataaagcttaatgagtttcccaagcacatcagcggcgaa
ggatccaagtctgcatcagtgcgggccctgctcttcgacatctccttcctcatgctctgc
catgtggttcagacatacgggtccgaggtgatcctgtcagaccccagtccttcaggggag
acgcccttctttgaaacatggctgcagacgtgtatgcctgaagagggcaagaccttgaac
ccagaccatccttgcttcagaccagagcctggcaaagtggaaagcctggttaccctgctg
aacaactcttcagagatgaaactagttcaggtgaaatggcacgaaatttgcctcagcact
ccggcagccatcctagaagttctgaacgcatgggaaaatggtgtgctgtctgtggaggca
gtacagaagataactgacaacatcaaagggaaagtgtgcagtatggccatctgtgcagtg
gcctggctggtggcacatgtcaggatgctggggagggacgagagagagaaacctcagact
atgatacgacagcttgttactccgctgtacggggagaacactctgcagttttacaatgaa
cgcgtgatcattatgagttccatcatggagcacatgtgtgctgacgtcttccaacaaaca
gccgcaactctacgcccaccagtggagggccaagagccgattccttaccgcaacctgctg
ccagccaaagaacccattcacacagccctcagcaagcagttccaggcagtgctgcgcaaa
ggctgggtggacagccgagccctgcatctgtttgagagtcttctcaacatgggaggggtt
ttctggttcaccaacaatttggtcaaggagctgctgaaggagactcgacaagagtgggcc
aatcgggtggtggagttactctacagcatcttctgcctggacactcagcagatcaccctc
accctgctgggtaccatactccccaacctgctcacagactccgcccactggcacagccta
gcagacccacctgggaaggcactggccaagttgtctgtgtggtgtgcactcagctcttac
tcctctcaccacaaaggctcgttctccgctcgtcaacgcaaaaggcagcgagaagatatt
gaggactacaacagcctctttcccttggatgacactcaaccatctaaacttatgcgcctg
ctcagctccaatgaggatgagcctgtagccctttccagcccaggagaccgatctatgagc
agttccctctcggcctcccagctccacactgtcaacatgagggaccctctgaaccgagtc
ctggccaaccttttcctactcatttcctccatcctcggctccaagatggctggccctcac
acccagtttgtacagagttttatggaggagtgcgtcgagtgcctggaacagggaagccgt
gggagcatattacagttcatgcctttcacaatggtttctgagctggttaagcttccggct
atggccaaacctaaagttgtcctggccatcactgacctgactctgccgctggggaggaga
gtagctgccaaagccatatctgccttgtaa
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