Lates calcarifer (barramundi perch): 108875675
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Entry
108875675 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nodal modulator 1
KO
K26500
BOS complex subunit NOMO
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108875675
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
108875675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
CarboxypepD_reg
NOMO1-like_2nd
NOMO1-like_1st
NOMO_12th
NOMO1-like_9th
Ig_NOMO
NOMO_5th
SdrD_B
EMC7_beta-sandw
SpaA
CarbopepD_reg_2
NOMO_3rd
NOMO_6th
fn3_3
NOMO_8th
Motif
Other DBs
NCBI-GeneID:
108875675
NCBI-ProteinID:
XP_018520267
UniProt:
A0AAJ7LD05
LinkDB
All DBs
Position
LG5:23423763..23445956
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AA seq
1991 aa
AA seq
DB search
MEVDSVFYTDRSGRITSNPLLDQLPSYQSLLYRRKSSTSGTKRRSSSRGRLGSSGSGKWG
LTTFSRRGEKQKGQTEQRPIRELAKTMAEKRRDKTQRLEDDRELSSWRQWRQSTGRYLRR
LKDDAQEWLSSLQLWRGDIHLIEGMFGTGILSYFSFLRFLVMLNLIIFLLMFSFVLLPII
IAPYASGNATYNQNDGSECSVYPSSARRGLVIFHEHITDLLSGGGFLEQTYLFYGYYKVD
KIHFPKITYNLPLAYLLATIAYLFLSLIWIVKRSAAGFKRNLIQDEDRFQSFCNKIFAGW
DFCITNENAARLKRSSLLYELRTDLEEERIKQKIADRTRKEKCRIYLIRLILNLFVIGVL
AGCFYSIYVATIFSQEAQLNDLKENFIMALIYEYLPSIVITLANFITPLVFSVIINFEDY
SPAFEIRFTLMRCVFMRLTSIGVLLFSLWSQITKCKEEPCKCGYNHVLYSCWETRVGQEM
YKLTIFDFIIIVAVTIFVEFPRKLIVKYCECGLAKWWGQQEFGIPQNVLEIVYGQTICWI
GTFYCPMLPAICTIKYFFIFYVKKLSLMKNCRPATRPFRASSSNFFFLGVLLIGLALACL
PVTVSVAQINCSQACGPFVNYTTSWMVMPTVVSQQSEKVQKLLFALSSEAFAVSFFVFTC
LAMFYVIALAGAHKRVINQLREQLAMEGRDKRFLIQKLCQAQRLSAVKSPVSKSQPRSSS
RSSLSYHTSFSSNFNDAVFLAHPPPDSSTHELSWYGTGGSVLLLGXQSAKMLKITIRADM
GSLWVLFCIVYSQFLTVSSDDIVVACGGFVKSDVEINYSLIEIKLYTKQGSLKYQTDCAP
INGYFMIPLYDKGDFVLKIEPPLGWSFEPTSVDLHVDGVSDICTKEEDINFVFTGFSVSG
MVLSKGHLLGPAGVEVRLSRAGTEEKLQSVITQPGGKYTFFKVLPGNYDITASHPSWTLE
QSATSVHVSNANAPATDHLVVGGYDVSGEVRSDGEPMKEVTFLLYSATVKREDVSGCNTS
PVEGADSGDSSLVYLCSALSREDGTFIFPSLASGEYTVVPFYRGERITFDVAPSRMNFKV
EHNSLKLEPIFRVMGFSVTGRVLNSVGGEGVSDATVSLNNQIKVVSKEDGSFRLENMTAG
TYTIRVNKDLMFFEPITVKIAPNTPQLPDIITAGFSVCGQISISRLPEGMKQQGRYKVTL
THQNQDKASSRTIDSDPQGAFCFQAKPGDYSVHVSLPEAEVKAGLALQPQALEVSLVDQP
LTDLLFTQFMASVSGKVYCLASCDDLSVTLQPVSRQGERRMVALSGSSDILSFSFDNVLP
GKYKVSISHEEWCWKHKSMEVEVLDSDIVGVEFRQIGYILRCSLSHAITLEFFQDGSKPE
NVGMYNLSKGVNRFCLSKPGVYKVTPRSCHQFEQDFYTYDTSAPSILTLTAVRHHMTGLI
TTDKILDVTVTIKSSIESEPALVLGPLRSLEEQRQEQQLQEIQLRRQEXERRAAEEDGGA
RDDSPPIQEKADELTGPFHYEFSYWARAGEKITVTPSSKELLFYPPEIEATITGESCPGR
LVDITGRAGLFLEGKVSPELQGVEISITERGAATPLITVATNEMGAYSVGPLHSDRQYDI
SASKEGFVLSPVEGTQGDFKAFALAGVTFKIKSEDGQPLSGVLLSLSGGQFRSNLLTQDT
GLLTFNNLSPGQYYFKPMMKEFRFEPASQMITVEEGQNLSIDITGIKTAYSCYGAVQSLS
GDAERDVAVEAVGQGECSLYSEDTVTDEEGRFRLRGLLPGCKYLIQLRAEGNDHIERALP
QHRAIEVGSSDIEGVNIIAFRQINQFDLSGNVITTPEHLPTLSVKLYKSDNLDNPINSVS
LGQSLFFHFPPLDRDGETYVLMLYSTLSRSQYDFTLPQVSFTSTGYHKHVTLTFNPTRKV
PDQDVAQGSYIALPLTLLLLLAAYNHEKVIPLLLQVMNRIQGVRSMAQTSGESAALDEAK
RQAKRQKARRT
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgactcagtgttctacactgatcgtagtggaagaattaccagtaacccgctg
ctggaccagctacccagctatcagtcgctactgtatcgcaggaagtcatcgaccagtggc
accaagcggagaagcagctccaggggtcggctcggctcctccggaagtgggaaatggggc
ttgaccacattcagcagacgcggggaaaagcagaagggtcagacagagcagagacccatc
agggaacttgccaagaccatggctgagaaacgcagggacaagacgcagcgtctggaggat
gatcgagagctcagcagctggagacagtggaggcaaagcaccggcaggtatctgaggagg
ttgaaagatgatgcccaagaatggctgagctccctgcagctttggaggggagacatccac
ctgatagaggggatgtttggcacagggatcctctcttacttctccttcttgcgcttcctg
gtcatgctcaacttgatcatctttctgcttatgtttagctttgtcttgttacccatcatc
attgccccctatgcttcagggaatgccacctacaaccagaatgatggaagcgagtgcagt
gtgtatccaagcagtgctcgacggggcctggttatctttcacgagcacattacagatttg
ctgtctggtggaggctttctggaacagacctatcttttctacggctactacaaggtggac
aaaatccactttccaaaaatcacttacaatttgccactggcatacctgctagccactata
gcatacctgttcctcagtctcatctggatcgttaaaaggtctgcagcaggattcaaacgt
aacctgattcaggatgaggatcgctttcagagtttttgcaacaagatctttgccgggtgg
gacttctgcatcaccaacgaaaatgctgctaggctgaagagaagcagcctgctctatgag
ctcaggacggatttggaagaagagaggatcaagcagaaaatagcggatcgcacccgcaaa
gaaaagtgtcggatttacctcatccgtctcatccttaacctttttgtcattggtgtgctg
gctggttgcttctacagcatttatgtagctaccatcttctcccaggaagcacagctgaat
gatctaaaggagaattttattatggctctcatctatgagtatctgccatcaattgttatt
accttggccaacttcatcaccccgctggtcttctccgtcatcatcaattttgaggattac
tctcctgcctttgagatccgcttcaccctcatgcgatgtgtcttcatgcggttgaccagt
attggggttttgctcttctctctctggtctcagatcactaaatgtaaagaagagccctgc
aaatgtggttataaccatgtgctttactcttgttgggagacccgcgtgggccaggagatg
tacaaactcaccatctttgacttcatcattattgttgcagtcaccatctttgtggagttt
cccagaaagctgatagtgaagtactgtgagtgtggcctggctaagtggtggggccagcag
gagtttggtattcctcagaatgttctagagatcgtctatggtcagaccatctgctggatc
ggcacattctactgcccgatgctgcctgccatctgcaccatcaaatacttctttatcttc
tacgtcaaaaagttatcattaatgaagaactgccgtccagccacacgtccatttcgagct
tctagctccaacttcttcttcctcggcgtgctgctgattggcctggctctggcctgtctg
cctgtcactgttagcgtagcacaaataaactgttcccaggcttgtgggccatttgttaat
tacaccacttcctggatggtgatgccaactgtggtatcccagcaatctgagaaagtccaa
aagctgctgtttgcgctctcatcagaggcctttgctgtttccttctttgtctttacatgc
ttggccatgttttatgtgattgcattagctggagctcacaaaagagttattaaccaactg
cgggagcagcttgccatggagggccgtgacaaacgtttcctgatccagaagctgtgccag
gcccagaggctctcagcagtcaaatctccagtgtccaaatcccagccccgcagcagcagc
agaagcagcctcagctaccataccagcttctccagcaatttcaatgacgctgtgttcctg
gcacatccacctccagactcctccacacatgagctcagctggtacggaaccggaggcagc
gtgctgttgctcggcnntcagtcagccaaaatgttgaaaattacgatccgggctgacatg
ggatccctctgggtgttgttctgtatcgtttattctcagttcttgaccgtgtcctctgat
gacatagtggtggcatgcgggggatttgtgaagtccgacgttgaaatcaactactctctg
atcgagattaaactgtacaccaaacaaggctccttgaaataccaaacagattgtgctcca
atcaatggctacttcatgatcccgctgtacgacaagggggactttgttttgaagattgag
cctcctcttgggtggagctttgagccaaccagtgttgacctccatgtggatggagttagt
gacatctgtaccaaagaggaagacatcaactttgttttcactggcttttcagtctcagga
atggttctgagtaagggccatctcctgggtccggctggagtagaagtcagattgagccga
gcgggaacagaggagaaactccagagtgtcatcacacagcctggaggaaagtataccttc
ttcaaagtactccctggaaattatgacatcacagcttcccatccctcctggactctggag
cagagcgctacctcggtgcacgtgtccaatgccaatgccccggccaccgaccatctggtg
gttgggggctatgatgtctcaggggaagtccgcagtgatggagagcccatgaaagaggtc
accttcctattgtactcagccacagtcaagagagaggacgtcagtggctgcaacacatct
ccggtggagggtgcagattctggcgacagctccctggtctacctgtgcagcgctctgtcc
agggaagatggcaccttcatcttcccctctctggccagtggagagtacactgtcgtgccc
ttctacagaggagagaggatcacttttgatgttgctccatccaggatgaatttcaaggtt
gaacacaacagtttgaagctagagcccatcttccgagtcatgggcttctctgtgacaggc
cgggttctgaacagtgtcggtggggagggtgtatctgatgctacggtgtccctcaacaac
cagatcaaagtcgtcagcaaggaggatggttctttccgtttggagaacatgacagctggt
acctacaccatccgtgtcaacaaggatctcatgttctttgagccaatcacagtgaagatt
gcccccaacacacctcagcttcctgacatcatcacagcagggttcagtgtgtgcggtcag
atctccatcagccgcctgcctgagggcatgaagcagcagggtcgctacaaggtcaccctg
acacaccagaaccaagacaaggcttccagccggacaatcgactccgaccctcagggggcc
ttctgctttcaggccaaacctggagactacagcgttcatgtgtctctccctgaggcggag
gtgaaagcaggcctggcactgcagcctcaagccctagaggtctccctcgtggaccagccc
ctcacagacctccttttcacccagttcatggcttctgtctctggaaaagtctactgtcta
gcatcctgcgatgacctctcagtaaccctccagccagtgagtcggcagggagagaggagg
atggtggctctgtctggcagcagcgacatcctcagcttctcctttgacaatgttctacct
gggaaatacaaagtgagtatttctcatgaggagtggtgctggaagcataagtccatggaa
gtggaagttctggattccgacatcgtaggggtggagttcagacaaattggctacatcctg
cgctgctccctctcccatgccatcaccctggagttcttccaagatggcagcaaacccgag
aacgtgggcatgtacaacctctctaagggagtcaaccgcttctgcctctccaagcctggt
gtttacaaagtcacccctcgctcctgccatcagtttgagcaggacttctacacctatgat
acctcggcccccagtatcctgaccctcactgcagtgcggcatcacatgaccgggctcatc
accaccgacaagattctagacgtcacagttaccatcaagtcgtccatcgagagcgaaccg
gcgctggtgctgggtccccttcggagcctagaggagcagcggcaggagcagcagctgcag
gagattcagctacgccgccaggaancggagcgtcgtgccgcagaggaagacggaggtgcc
agggatgacagccctccaatccaagagaaagcagatgaactgacaggccctttccactat
gagttttcctactgggccagggctggagagaaaatcacagtgactccctcctccaaggag
ctgctgttctacccacctgaaatagaggccacaatcaccggagagtcctgtcccggtcgg
ctggtggacatcacagggcgtgcaggtctcttcctggagggcaaggtgtcaccagagctc
cagggtgtagagatctccatcactgaaagaggagctgctacaccgctcattactgtggcc
actaatgagatgggagcatacagtgtgggtccacttcacagcgaccggcagtacgacatc
agtgccagtaaagagggttttgtcctgagtcctgtggagggaacccagggagatttcaag
gcattcgctctggctggtgtcaccttcaagatcaaatcagaggatggtcagcctctgtca
ggcgtccttctctctctgagcggaggacagtttcgctccaaccttttgacccaggacact
ggccttctcacctttaataacctgagtcctggtcagtactacttcaagcccatgatgaag
gagttccgcttcgagccggcatctcagatgatcacagtggaagaaggtcaaaacctcagt
atcgacataacgggcattaagactgcatacagctgctatggagcggtgcagtctctgagc
ggggatgcagagcgggatgttgctgtggaggcggtgggtcagggagagtgcagcctctac
agcgaggataccgtcacagatgaggagggccgcttcagactcaggggtctgctgccgggt
tgcaagtatctgattcagctgcgcgctgaaggcaacgaccacatagagagggctctgcca
caacatagagctatagaggtcggcagcagtgacatcgaaggggtcaacattatcgccttc
aggcagatcaatcagtttgacctcagcggaaatgtcatcacgacccctgaacatctccca
acactatcggtgaagctgtataagagtgacaatctggacaatccaatcaacagcgtctct
ctgggacagtccctcttcttccacttccctcctctggacagagatggagagacctatgtt
ctgatgctgtactccacgctgtcccgctcccagtatgacttcaccctgccccaggtctcc
ttcacctccaccggctaccacaagcacgtcacgctcaccttcaatcccacccgtaaagtg
cctgatcaagatgttgcccaaggctcctacatagctcttcccctcactctgctgctcctg
ttagcagcatacaaccatgagaaggtgatccccctcctcttgcaggtcatgaaccgtatc
cagggagtgaggagtatggcccaaaccagcggggagagcgccgccctggatgaagccaaa
cgtcaggccaagagacagaaagccaggcgcacgtga
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